Revisiting Linus’s law: Benefits and challenges of open source software peer review

Open source projects leverage a large number of people to review products and improve code quality. Differences among participants are inevitable and important to this collaborative review process—participants with different expertise, experience, resources, and values approach the problems differently, increasing the likelihood of finding more bugs and fixing the particularly difficult ones. To understand the impacts of member differences on the open source software peer review process, we examined bug reports of Mozilla Firefox. These analyses show that the various types of member differences increase workload as well as frustration and conflicts. However, they facilitate situated learning, problem characterization, design review, and boundary spanning. We discuss implications for work performance and community engagement, and suggest several ways to leverage member differences in the open source software peer review process.     

Transposable Elements and Stress in Vertebrates: An Overview

Since their identification as genomic regulatory elements, Transposable Elements (TEs) were considered, at first, molecular parasites and later as an important source of genetic diversity and regulatory innovations. In vertebrates in particular, TEs have been recognized as playing an important role in major evolutionary transitions and biodiversity. Moreover, in the last decade, a significant number of papers has been published highlighting a correlation between TE activity and exposition to environmental stresses and dietary factors. In this review we present an overview of the impact of TEs in vertebrate genomes, report the silencing mechanisms adopted by host genomes to regulate TE activity, and finally we explore the effects of environmental and dietary factor exposures on TE activity in mammals, which is the most studied group among vertebrates. The studies here reported evidence that several factors can induce changes in the epigenetic status of TEs and silencing mechanisms leading to their activation with consequent effects on the host genome. The study of TE can represent a future challenge for research for developing effective markers able to detect precocious epigenetic changes and prevent human diseases.     

Different diets affecting biology and digestive physiology of the Khapra beetle,Trogoderma granarium Everts (Coleoptera: Dermestidae)

The Khapra beetle, Trogoderma granarium Everts (Coleoptera: Dermestidae), is a serious pest of grain and other stored products through the world. In this research, effect of five host diets including barley, rice, rye, wheat and walnut was studied on some of biological traits, nutritional indices and digestive enzymatic activity of T. granarium at 33 ± 1 °C, 65 ± 5% RH and a photoperiod of 14:10 (L:D) h. The Khapra beetle larvae reared on walnut had the highest number of larval instar and longest duration of larval and pupal stages (91.30 ± 0.4 days). The heaviest pupal weight of T. granarium was on rye (4.22 ± 0.01 mg) and the lightest weight was on rice (3.99 ± 0.01 mg) and walnut (4.00 ± 0.01 mg). The highest realized fecundity and fertility were recorded for the females reared on rye (45.88 ± 1.08 eggs/female and 69.39 ± 0.68%, respectively) and wheat (49.02 ± 1.55 eggs/female and 67.54 ± 0.69%, respectively), and the lowest ones were observed for the females came from larvae fed walnut (15.45 ± 0.71 eggs/female and 34.55 ± 0.82%, respectively). Also, the results showed that T. granarium larvae reared on walnut had the lowest values of the efficiency of conversion of ingested food (7.67 ± 0.04%) and relative growth rate (0.044 ± 0.0002 mg/mg/day). The lowest midgut amylolytic (0.044 ± 0.0005 and 0.047 ± 0.0005 mU/individual, respectively) and proteolytic (0.015 ± 0.0004 and 0.016 ± 0.0001 mU/individual, respectively) activity of the sixth instar was detected on walnut and rice. The highest inhibition of amylase (53.37 ± 0.75%) and protease activity (48.54 ± 0.96%) was estimated by incubating midgut extracts from the last instars with wheat and barley proteinaceous extracts, respectively. The results indicated that walnut was the most unsuitable diet for feeding and development of T. granarium.     

European natural gas seasonal effects on futures hedging

This paper is the first to discuss the design of futures hedging strategies in European natural gas markets (NBP, TTF and Zeebrugge). A common feature of energy prices is that conditional mean and volatility are driven by seasonal trends due to weather, demand, and storage level seasonalities. This paper follows and extends the Ederington and Salas (2008) framework and considers seasonalities in mean and volatility when minimum variance hedge ratios are computed. Our results show that hedging effectiveness is much higher when the seasonal pattern in spot price changes is approximated with lagged values of the basis (futures price minus spot price). This fact remains true for short (a week) and long (one, three and six months) hedging periods. Furthermore, volatility of weekly price changes also has a seasonal pattern and is higher in winter than in summer. A simple volatility seasonal model that is based on sinusoidal functions on the basis improves the risk reduction obtained by strategies in which hedging ratios are estimated with linear regressions. Seasonal hedging strategies, linear regression based strategies, or even a naïve position, perform better than more sophisticated statistical methods.     

Effect of biodegradable film (lyophilised alga Fucus spiralis and sorbic acid) on quality properties of refrigerated megrim (Lepidorhombus whiffiagonis)

The effect of replacing the on‐board currently employed polyethylene film by a novel type of environmentally friendly packaging was studied. For it, a polylactic acid (PLA) biodegradable film including lyophilised alga Fucus spiralis and sorbic acid was applied during megrim (Lepidorhombus whiffiagonis) refrigeration and its effect on fish quality loss was evaluated. Thus, sensory assessment showed that samples wrapped up with PLA film including 8% alga and 1% sorbic acid were still acceptable on day 11, while control fish specimens (kept under polyethylene film) were rejected at that time. Under such biodegradable film condition, a preservative effect was also implied according to chemical indices assessment related to microbial activity (trimethylamine–N) and lipid oxidation development (peroxide and fluorescent compounds formation); additionally, lower mean numbers for different microbiological groups (aerobes, Enterobacteriaceae and psychrotrophs) were detected. This result provides a promising replacement strategy to enhance refrigerated fish quality and reduce the waste material content.     

Testing EGFR with Idylla on Cytological Specimens of Lung Cancer: A Review

The current standard of care for advanced non-small-cell lung cancer is based on detecting actionable mutations that can benefit from targeted therapy. Comprehensive genetic tests can have long turn-around times, and because EGFR mutations are the most prevalent actionable mutation, a quick detection would enable a prompt initiation of targeted therapy. Furthermore, the scarcity of diagnostic material means that sometimes only cytologic material is available. The Idylla™ EGFR assay is a real-time PCR–based method able to detect 51 EGFR mutations in 2.5 h. Idylla is validated for use only on FFPE sections, but some researchers described their experiences with cytological material. We reviewed the relevant literature, finding four articles describing 471 cases and many types of cytological input material: smears, cell-block sections, suspensions, and extracted DNA. The sensitivity, specificity, and limit of detection appear comparable to those obtained with histological input material, with one exception: the usage of scraped stained smears as input may reduce the accuracy of the test. In conclusion, usage of cytological material as input to the Idylla EGFR test is possible. A workflow where common mutations are tested first and fast, leaving rarer mutations for subsequent comprehensive profiling, seems the most effective approach.     

Using laser ablation inductively coupled plasma mass spectroscopy (LA-ICP-MS) to determine the provenance of the cobalt pigment of Qinghua porcelain from Jingdezhen in Yuan Dynasty of China (1271–1368AD)

The provenance of cobalt mineral of the blue decoration in Yuan Qinghua porcelain would reveal the technological and cultural interaction between ancient China and the Islamic world. However, the limitation of conventional methods in the determining trace elements of the blue decoration hampered the deep research on provenance of the cobalt mineral. In the paper, we employed the good advantage of Laser-ablation-inductively-coupled-plasma-mass-spectroscopy (LA-ICP-MS) to determine the major element and trace elements of blue decoration of the different type of Qinghua successfully. The blue decoration of all different types of samples shared the same characteristics of higher FeO and lower Mn, which suggested the potter adopted the non-native cobalt material of China to paint the Yuan Qinghua in Jingdezheng, and the difference on the outside appearance of blue decoration of different samples were supposed to be related to the tenor of ore, the different treatment process of cobalt material and the firing process in the kiln. In addition, the significant differences on the element concentrations of Cu, Ni, Pb, Zr and Sb in the blue decoration between Yuan Qinghua and the Islamic blue and white wares of 13–14th century provided a new evidence to discuss the provenance of the cobalt of Yuan Qinghua porcelain.     

Toughening effect of carbon nanotubes and carbon nanofibres in epoxy adhesives for joining carbon fibre laminates

The effect of carbon nanotubes (CNTs) and carbon nanofibres (CNFs) on mode I adhesive fracture energy (G_IC) of double cantilever beam (DCB) joints of carbon fibre-reinforced laminates bonded with an epoxy adhesive has been studied. It was observed that the presence of carbon nanofillers in the epoxy adhesive results in a significant increase in the propagation value of mode I adhesive fracture energy with CNTs producing the largest increase. The toughening mechanisms, analysed using scanning electron microscopy (SEM), for the two nanofiller systems differed: pull-out with CNFs, and pull-out and crack bridging with CNTs. At the macroscopic level there was also a change in the failure mode, with an increased proportion of delamination occurring in the nanoreinforced joints in comparison with the unreinforced. Two different surface treatments were also applied to the laminates: grit blasting and atmospheric plasma. The highest fracture energy was obtained in the grit blasted joints.     

3D printing technology: The new era for food customization and elaboration

BackgroundDigitalizing food using 3-Dimensional (3D) printing is an incipient sector that has a great potential of producing customized food with complex geometries, tailored texture and nutritional content. Yet, its application is still limited and the process utility is under the investigation of many researchers.Scope and approachThe main objective of this review was to analyze and compare published articles pertaining 3D food printing to ensure how to reach compatibility between the huge varieties of food ingredients and their corresponding best printing parameters. Different from previously published reviews in the same journal by Lipton et al. (2015) and Liu et al. (2017), this review focuses in depth on optimizing extrusion based food printing which supports the widest array of food and maintains numerous shapes and textures. The benefits and limitations of 3D food printing were critically reviewed from a different perspective while providing ample mechanisms to overcome those barriers.Key findings and conclusionsFour main obstacles hamper the printing process: ordinance and guidelines, food shelf life, ingredients restrictions and post processing. Unity and integrity between material properties and process parameters is the key for a best end product. For each group, specific criteria should be monitored: rheological, textural, physiochemical and sensorial properties of the material its self in accordance with the process parameters of nozzle diameter, nozzle height, printing speeds and temperature of printing. It is hoped that this paper will unlock further research on investigating a wider range of food printing ingredients and their influence on customer acceptability.