Geochemical characteristics and accumulation of hydrocarbon in Lower Jurassic tight sandstone in Wenjisang area,Turpan Basin,NW China

In order to investigate the geochemical characteristics, sources and accumulation process of Lower-Jurassic Sangonghe Formation tight sandstone oil, multiple geochemical analyses were performed on source rocks, oil samples and sandstone particles from Wenjisang area in Turpan Basin. The results show that coal-measure source rocks have relatively higher organic matter abundance and type-II organic matter for Xishanyao and Badaowan Formations, with the potential of liquid hydrocarbon generation. Oil samples of Sangonghe Formation have the characteristics of coal-measure-formed oil. Higher maturity indicate the oil may be mainly generated by Lower-Jurassic Badaowan Formation source rocks. Quantitative fluorescence parameters also reflect that hydrocarbons charged into Sangonghe Formation through continuous migration from the bottom of sand body to the top gradually. In down dip direction of Wenjisang area may develope continuous tight oil and gas reservoirs in Lower Jurassic.     

HIGHER LANDPLANT –DERIVED BIOMARKERS IN LIGHT OILS AND CONDENSATES FROM THE COAL-BEARING EOCENE PINGHU FORMATION,XIHU SAG,EAST CHINA SEA SHELF BASIN

The Cenozoic Xihu Sag in the East China Sea Shelf Basin contains large reserves of coals together with liquid petroleum derived from coal-associated sediments. However, the origin of the petroleum is not well understood. In this study, biomarker assemblages in a suite of recently discovered light oils and condensates from the Paleogene succession in the western margin of in the Xihu Sag were investigated using gas chromatography – mass spectrometry. The objectives were to investigate the samples' thermal maturity and the depositional environment of the precursor source rocks which generated the oils. The light oils are believed to have been derived from coaly source rocks in the Eocene Pinghu Formation. Assessment of thermal maturity based on CPI, pristane/n-C₁₇ ratio and isomerisation ratios of C₂₉ steranes and C₃₁ homohopanes suggest that the hydrocarbons have a relatively low maturity in the early to mid oil generation window. The distribution of isoprenoids relative to n-alkanes, the high pristane/phytane ratios (5.1–10.7), the almost complete absence of gammacerane and C₃₃₊ homohopanes, and the low dibenzothiophene/phenanthrene ratios indicate that the source rocks of the hydrocarbons were deposited in a relatively oxic and sulphate-poor fluvio-deltaic environment which was favourable for coal measure development. Abnormally abundant gymnosperm-derived diterpanes including labdane, 19-norisopimarane, fichtelite, rimuane, pimarane, isopimarane, 17-nortetracyclic diterpene, phyllocladanes and abietane were detected in the samples analysed. 16a(H)-Phyllocladane was identified unambiguously and kauranes were confirmed to be absent. In addition, three 19-norisopimarane isomers, 13β(H)-atisane, and 20-normethylatisane were tentatively identified in the studied samples. The distributions of n-alkanes, isoprenoids and regular steranes, the presence of 4β(H)-eudesmane and oleanane, high Pr/Ph ratios and the abundant diterpanes together suggest that the hydrocarbons were derived from a coaly source rock. Gymnosperms of the conifer families Cupressaceae (especially the former Taxodiaceae) and Pinaceae are interpreted to be the major source of the diterpanes and to have made a significant contribution to the coaly source rock. However, the low abundance of oleanane relative to diterpanes may underestimate the contribution from angiosperms relative to gymnosperms. This could be due to differential preservation and alteration of the di- and triterpenoid precursors during diagenesis and the occurrence of non-specific precursors in higher land plants.     

THE OLIGOCENE–MIOCENE MENILITE FORMATION IN THE UKRAINIAN CARPATHIANS: A WORLD‐CLASS SOURCE ROCK

This study investigates the hydrocarbon potential of Oligocene–Miocene shales in the Menilite Formation, the main source rock in the Ukrainian Carpathians. The study is based on the analysis of 233 samples collected from outcrops along the Chechva River in western Ukraine in order to analyse bulk parameters (TOC, Rock‐Eval), biomarkers and maceral composition. In Ukraine, the Menilite Formation is conventionally divided into Lower (Lower Oligocene), Middle (Upper Oligocene) and Upper (Lower Miocene) Members. The Early Oligocene and Early Miocene ages of the lower and upper members are confirmed by new nannoplankton data. The Lower Menilite Member is approximately 330 m thick in the study area and contains numerous chert beds and turbidite sandstones in its lower part together with organic‐rich black shales. The shales have a high content of silica which was probably derived from siliceous micro‐organisms. The TOC content of the shales frequently exceeds 20 wt.% and averages 9.76 wt.%. HI values range between 600 and 300 mgHC/gTOC (max. 800 mgHC/gTOC). The Middle Member contains thin black shale intervals but was not studied in detail. The Upper Member is about 1300 m thick in the study area and is composed mainly of organic‐rich shales. Chert layers are present near the base of the Member, and a prominent tuff horizon in the upper part represents a volcanic phase during shale deposition. The member grades into overlying molasse sediments. The average TOC content of the Upper Menilite succession is 5.17 wt.% but exceeds 20 wt.% near its base. Low T_max and vitrinite reflectance measurements for the Lower (419°C and 0.24–0.34 %R_r, respectively) and Upper (425°C and 0.26–0.32 %R_r, respectively) Menilite Member successions indicate thermal immaturity. Biomarker and maceral data suggest a dominantly marine (Type II) organic matter input mixed with varying amounts of land‐plant derived material, and indicate varying redox and salinity conditions during deposition. Determination of the Source Potential Index (SPI) shows that the Menilite Formation in the study area has the potential to generate up to 74.5 tons of hydrocarbons per m². The Chechva River outcrops therefore appear to have a significantly higher generation potential than other source rocks in the Paratethys realm. These very high SPI values for the Menilite Formation may explain why a relatively small area in Ukraine hosts about 70% of the known hydrocarbon reserves in the northern and eastern Carpathian fold‐thrust belt.     

Effects of Cancer Presence and Therapy on the Platelet Proteome

Platelets are involved in tumor angiogenesis and cancer progression. Previous studies indicated that cancer could affect platelet content. In the current study, we investigated whether cancer-associated proteins can be discerned in the platelets of cancer patients, and whether antitumor treatment may affect the platelet proteome. Platelets were isolated from nine patients with different cancer types and ten healthy volunteers. From three patients, platelets were isolated before and after the start of antitumor treatment. Mass spectrometry-based proteomics of gel-fractionated platelet proteins were used to compare patients versus controls and before and after treatment initiation. A total of 4059 proteins were detected, of which 50 were significantly more abundant in patients, and 36 more in healthy volunteers. Eight of these proteins overlapped with our previous cancer platelet proteomics study. From these data, we selected potential biomarkers of cancer including six upregulated proteins (RNF213, CTSG, PGLYRP1, RPL8, S100A8, S100A9) and two downregulated proteins (GPX1, TNS1). Antitumor treatment resulted in increased levels of 432 proteins and decreased levels of 189 proteins. In conclusion, the platelet proteome may be affected in cancer patients and platelets are a potential source of cancer biomarkers. In addition, we found in a small group of patients that anticancer treatment significantly changes the platelet proteome.     

Extracellular Vesicles in Blood: Sources,Effects, and Applications

Extracellular vesicles (EVs) are important players for intercellular communication. EVs are secreted by almost all cell types; they can transfer information between nearby or distant cells, and they are highly abundant in body fluids. In this review, we describe the general characteristics of EVs, as well as isolation and characterization approaches. Then, we focus on one of the most relevant sources of EVs: the blood. Indeed, apart from EVs secreted by blood cells, EVs of diverse origins travel in the bloodstream. We present the numerous types of EVs that have been found in circulation. Besides, the implications of blood-derived EVs in both physiological and pathological processes are summarized, highlighting their potential as biomarkers for the diagnosis, treatment monitoring, and prognosis of several diseases, and also as indicators of physiological modifications. Finally, the applications of EVs introduced in the circulatory system are discussed. We describe the use of EVs from distinct origins, naturally produced or engineered, autologous, allogeneic, or even from different species and the effects they have when introduced in circulation. Therefore, the present work provides a comprehensive overview of the components, effects, and applications of EVs in blood.     

HIV-Associated Cancer Biomarkers: A Requirement for Early Diagnosis

Globally, HIV/AIDS and cancer are increasingly public health problems and continue to exist as comorbidities. The sub-Saharan African region has the largest number of HIV infections. Malignancies previously associated with HIV/AIDS, also known as the AIDS-defining cancers (ADCs) have been documented to decrease, while the non-AIDS defining cancer (NADCs) are on the rise. On the other hand, cancer is a highly heterogeneous disease and precision oncology as the most effective cancer therapy is gaining attraction. Among HIV-infected individuals, the increased risk for developing cancer is due to the immune system of the patient being suppressed, frequent coinfection with oncogenic viruses and an increase in risky behavior such as poor lifestyle. The core of personalised medicine for cancer depends on the discovery and the development of biomarkers. Biomarkers are specific and highly sensitive markers that reveal information that aid in leading to the diagnosis, prognosis and therapy of the disease. This review focuses mainly on the risk assessment, diagnostic, prognostic and therapeutic role of various cancer biomarkers in HIV-positive patients. A careful selection of sensitive and specific HIV-associated cancer biomarkers is required to identify patients at most risk of tumour development, thus improving the diagnosis and prognosis of the disease.     

代谢组学在食品发酵研究中的应用现状及展望

介绍代谢组学的概念、特性和技术平台.综述代谢组学在食品发酵研究中的应用现状,包括发酵菌种筛选、分类和鉴定,功能基因研究和代谢途径解析,发酵过程调控和工艺优化等多个方面.分析当前存在的问题,并对代谢组学在食品发酵研究中的发展前景作展望.     

Decoding the Roles of Long Noncoding RNAs in Hepatocellular Carcinoma

Hepatocellular carcinoma (HCC) is one of the most prevalent malignancies worldwide. HCC is associated with several etiological factors, including HBV/HCV infections, cirrhosis, and fatty liver diseases. However, the molecular mechanism underlying HCC development remains largely elusive. The advent of high-throughput sequencing has unveiled an unprecedented discovery of a plethora of long noncoding RNAs (lncRNAs). Despite the lack of coding capacity, lncRNAs have key roles in gene regulation through interacting with various biomolecules. It is increasingly evident that the dysregulation of lncRNAs is inextricably linked to HCC cancer phenotypes, suggesting that lncRNAs are potential prognostic markers and therapeutic targets. In light of the emerging research in the study of the regulatory roles of lncRNAs in HCC, we discuss the association of lncRNAs with HCC. We link the biological processes influenced by lncRNAs to cancer hallmarks in HCC and describe the associated functional mechanisms. This review sheds light on future research directions, including the potential therapeutic applications of lncRNAs.     

Cytokines and MicroRNAs as Candidate Biomarkers for Systemic Lupus Erythematosus

Systemic lupus erythematosus (SLE) is a systemic autoimmune disease, with varied course and symptoms. Its etiology is very complex and not clearly understood. There is growing evidence of the important role of cytokines in SLE pathogenesis, as well as their utility as biomarkers and targets in new therapies. Other potential new SLE biomarkers are microRNAs. Recently, over one hundred different microRNAs have been demonstrated to have a significant impact on the immune system. Various alterations in these microRNAs, associated with disease pathogenesis, have been described. They influence the signaling pathways and functions of immune response cells. Here, we aim to review the emerging new data on SLE etiology and pathogenesis.     

Mesenchymal and Proneural Subtypes of Glioblastoma Disclose Branching Based on GSC Associated Signature

Glioblastomas (GBM)—the most common, therapy-resistant, and lethal tumors driven by populations of glioma stem cells (GSCs) are still on the list of the most complicated pathologies. Thus, deeper understanding and characterization of GSCs is indispensable to find suitable targets and develop more effective therapies. In the present study, we applied native glioblastoma cells and GSCs sequencing, screened for GSC-specific targets and checked if the signature is related to GBM patient pathological, clinical data as well as molecular subtypes applying TCGA cohort. Data analysis revealed that tumors of proneural and mesenchymal subtypes are branching in separate clusters based on screened gene expression. Samples of the same subtype revealed significantly different patient survival prognosis as well as recurrence chance between the clusters. Recently, different subpopulations of mesenchymal GSC demonstrating different properties were shown, which indicates possible internal heterogeneity of GBM subtypes as well. Current findings also revealed branching of molecular GBM subtypes that were significantly linked to patient outcome and that might be decided by distinct GSC subpopulations.