Cold and wet: Diatoms dominate the phytoplankton community during a year of anomalous weather in a Great Lakes estuary

As sentinels of climate change and other anthropogenic forces, freshwater lakes are experiencing ecosystem disruptions at every level of the food web, beginning with the phytoplankton, a highly responsive group of organisms. Most studies regarding the effects of climate change on phytoplankton focus on a potential scenario in which temperatures continuously increase and droughts intersperse heavy precipitation events. Like much of the conterminous United States in 2019, the Muskegon River watershed (Michigan, USA) experienced record-breaking rainfall accompanied by unusually cool temperatures, affording an opportunity to explore how an alternate potential climate scenario may affect phytoplankton. We conducted biweekly sampling of environmental variables and phytoplankton in Muskegon Lake, a Great Lakes Area of Concern that connects to Lake Michigan. We compared environmental variables in 2019 to the previous eight years using long-term data from the Muskegon Lake Observatory buoy, and annual monitoring excursions provided historical phytoplankton data. Under cold and wet conditions, diatoms were the single dominant division throughout the entire growth season – an unprecedented scenario in Muskegon Lake. In 10 of the 13 biweekly sampling days in 2019, diatoms comprised over 75% of the phytoplankton community in the lake by count, indicating that the spring diatom bloom persisted through the fall. Additionally, phytoplankton seasonal succession and abundance patterns typically seen in this lake were absent. In a world experiencing reduced predictability, increased variability, and regional climate anomalies, studying periods of extreme weather events may offer insight into how natural systems will be affected and respond under future climate scenarios.     

Paleolimnological proxies reveal continued eutrophication issues in the St. Lawrence River Area of Concern

Recent surface-water surveys suggest that high nutrient concentrations and nuisance algae remain issues in the St. Lawrence River Area of Concern (AOC) at Cornwall, Ontario, specifically in the tributaries and nearshore zones of Lake St. Francis (LSF). In particular, it is unclear whether management actions designed to reduce nutrient inputs, first implemented in the 1990s as part of the Remedial Action Plan for the AOC, have reduced algal production or influenced assemblage composition. To address this issue, a paleolimnological approach was used to provide a historical context for the present-day nutrient concentrations and to quantify the extent of change in water quality in LSF since the early 1990s. A sediment core was collected near the north shore of LSF and was examined for changes in the concentrations and compositions of fossil diatoms and pigments, as well as stable isotope (δ¹⁵N and δ¹³C) values. Analyses of diatom and pigment concentrations indicated that overall algal abundance has risen in the last few decades, including trends of increasing occurrences of potentially toxic cyanobacteria, despite ongoing remediation efforts. Temporal patterns of stable isotope signatures in the core suggest a steady increase in nutrient influx since the mid-20th century, with the post-1990 increase in algal production likely attributable to recent inputs associated with land-use changes in local contributing watersheds. These patterns suggest that the AOC delisting goals for the LSF tributaries will not be reached without a drastic change in land management practices.     

Revision of the needle-shaped Fragilaria species (Fragilariaceae,Bacillariophyta) in the Laurentian Great Lakes (United States of America,Canada)

We investigated several common, needle-shaped diatoms to better characterize the taxonomy of the genus Fragilaria in the Laurentian Great Lakes. We conducted diatom morphometric analysis facilitated by SEM and LM imaging on samples collected as a part of the USEPA’s long-term biological monitoring program. We resolved several decades-long taxonomic problems in the Great Lakes. The results indicated that previous records of species formerly belonging to the genus Synedra, such as S. (Fragilaria) ostenfeldii, S. (Fragilaria) radians, and S. filiformis, should be corrected as these species likely do not occur in the Great Lakes. Valve morphology confirmed the presence of four previously undescribed species: Fragilaria andreseniana sp. nov., Fragilaria stoermeriana sp. nov., Fragilaria limnetica sp. nov., and Fragilaria michiganensis sp. nov. The morphology of several other Fragilaria taxa in the Great Lakes was examined, including a teratologic taxon (Fragilaria sp. 1), Fragilaria crotonensis, Fragilaria grunowii, and a taxon showing morphological affinity to Fragilaria lemanensis (reported here as Fragilaria cf. lemanensis). The spatial and seasonal distributions of these needle-shaped taxa were also analyzed and discussed.     

Natural, anthropogenic and fossil organic matter in river sediments and suspended particulate matter: a multi-molecular marker approach

Different classes of organic matter (OM) have been systematically investigated in sediments and suspended particulate matter (SPM) along the Danube River in order to understand causes of compositional changes. Analytical pyrolysis revealed the dominance of natural organic matter (NOM) in most of the samples. The predominance of aquatic biomass is evident mainly from the abundance of organonitrogen compounds and phenol distributions. As the river enters a forested gorge, the terrestrial component of the NOM in sediments is more significant. This is reflected in abundant methoxyphenols and a very high carbon preference index. SPM sample from a tributary shows a unique geochemical signature. It contains abundant carboxylic acids, amines, isoprenoids in the pyrolyzate, and is dominated by phytol and 24-methyl-cholesta-5,24(28)-dien-3β-ol in the extract, produced by a diatom bloom. Wax esters with a relatively high proportion of short, methyl-branched alkyl-chains appear together with abundant phytadienes and n-C₁₇ alkane in some samples, suggesting a microbial origin. Anthropogenic OM from runoff and atmospheric deposition was evident from a minor input of polycyclic aromatic hydrocarbons (PAHs) originating from mixed combustion sources. Multivariate analysis using PAH data led us to define simple molecular ratios to distinguish the PAH composition in sand and silty sediments. The newly defined ratios are the alkylated phenanthrenes and anthracenes ratio (APA; C₁-C₃/C₀-C₃ phenanthrenes and anthracenes) and the PAH ring number ratio (RN; 5-6 ring parent PAHs/all parent PAHs). This demonstrates that alkylated, as well as 5-6 ring PAHs are better preserved in the finer than in coarser grained sediments. A ubiquitous, but minor input of petroleum-related contamination with a uniform composition was evident in all samples as revealed by the analysis of petroleum biomarkers. This study demonstrates that the investigation of different classes of riverine OM requires a detailed molecular analysis, applying a series of analytical techniques and adequate statistical data treatment.     

PARAFAC modeling of three-way hyperspectral images: Endogenous fluorophores as health biomarkers in aquatic species

Demand for a renewable liquid-phase fuel has reinvigorated interest in the development of novel biofuels from algae. The effects of fluctuating nutrients, temperature, and predation which arise in algal aquaculture necessitate novel analytical methods to assess and optimize the health of these cultures. In this article we describe the use of trilinear modeling to these ends, using imaging data of endogenous fluorescence from the marine diatom, Thalassiosira pseudonana, collected on a hyperspectral fluorescence confocal microscope (HSF-CM). By combining the spatial and spectral data with the additional physical parameter introduced by the varying photobleach rates of endogenous fluorophores, we obtain a means for employing trilinear analysis in this system. In this case, analysis was implemented using the method of parallel factors analysis (PARAFAC) which alleviates the rotational ambiguities involved in multivariate analysis of 2-way data. By imposing a nutrient limitation in our diatom culture, and collecting single cell microscopy data at various time points during the nutritional stress, PARAFAC results reveal evolution of the spectral emission characteristics of six components and a background as a result of incremental photobleaching. Although the underlying mechanisms for these observations are not addressed, the differences observed between nutritively normal and nutritively stressed cells provide signatures for early detection of health deterioration in the algal culture. Finally, the combination of hyperspectral fluorescence microscopy with PARAFAC is generally applicable for the study of complex biological systems with endogenous fluorescence.     

Silica Regeneration Processes in Nearshore Southern Lake Michigan

The seasonal depletion of dissolved silica to levels that limit diatom production is particularly critical in Lake Michigan's nearshore zone where diatom biomass is greatest, and where silica regeneration from sediments is not well-understood. In our study, intact, medium-fine sand cores, collected from an 11 m deep site in nearshore Lake Michigan during July-August 1980, released soluble reactive silica (SRS) at a mean rate of 2,707 ± 122 (SE) μg Si cm^?2 yr^?1 when incubated in darkness and at 12° C. This measured SRS release was greater than a diffusive flux (270 ± 49 (90% C.I.) μg Si cm^?2 yr^?1) estimated from SRS pore water profiles and physical sediment properties. SRS release from individual cores was not correlated with abundance of most macroinvertebrates (chironomids, pisidiid clams, or oligochaetes). However, a significant (P < 0.05) and inverse relationship between SRS release and Pontoporeia hoyi densities implied that amphipods suppressed SRS release through mixing and burial of a surficial floe layer, where most dissolution of biogenic silica occurs. Moreover, SRS release rates measured from our coarse-grained nearshore sediments were comparable to rates reported for fine-grained offshore material and further implicate dissolution of surficial biogenic silica as the source of remineralized SRS. Because nearshore areas of Lake Michigan undergo strong seasonal variations in temperature and diatom production, and because significant riverine silica inputs exist, we cannot extrapolate our results on a lakewide, or season-long basis. The data, however, strongly imply that nearshore sediments are an important participant in the Lake Michigan silica cycle.     

The engineering geological characteristics of lake sediments in the Yuanshan area, Ilan City, Taiwan

 The paper describes a study of the sedimentology and some engineering parameters related to the geological characteristics of the lake sediments which formed behind a barrier dam in a suburb of Ilan City, north east Taiwan. It is concluded that the variation in engineering parameters is strongly influenced by the proportion of diatoms present. Received: 14 November 1997 · Accepted: 20 January 1998     

Atomic force microscopy (AFM) characterisation of the porous silica nanostructure of two centric diatoms

The porous silica nanostructure of two marine, centric diatoms, Coscinodiscus sp. and Thalassiosira eccentrica was investigated by atomic force microscopy (AFM). Important morphological features of the silica frustules of diatoms are described, including: the organisation of porous silica layers, their topography, pore size, shape and density. The outer layer of Coscinodiscus sp., commonly called the cribellum, consists of a characteristic hexagonal array of pores with pore sizes of around 45 nm. This thin membrane covers a second structural layer where two different silica surfaces are identified. The outer part, known as the cribrum consists of hexagonally packed pores of about 200 nm diameter. The inner part, known as the foramen layer, consists of larger and radially distributed holes with a diameter of around 1,150 nm. The second diatom species investigated, T. eccentrica produces a frustule with one silica structural layer featuring two different porous surfaces. The outer surface has large (800 nm diameter) holes (foramen) while the inner surface contains a porous wall with pores comparable in size to the Coscinodiscus sp. cribellum. The inner and outer surfaces of the frustule wall of both diatoms are hence in reverse order. However, the size of the small pores is similar for both species. High-resolution AFM also revealed the granular nanostructure of the diatom biosilica with grain sizes from 20 to 70 nm diameters.     

Functionalized diatom silica microparticles for removal of mercury ions

Diatom silica microparticles were chemically modified with self-assembled monolayers of 3-mercaptopropyl-trimethoxysilane (MPTMS), 3-aminopropyl-trimethoxysilane (APTES) and n-(2-aminoethyl)-3-aminopropyl-trimethoxysilane (AEAPTMS), and their application for the adsorption of mercury ions (Hg(II)) is demonstrated. Fourier transform infrared spectroscopy and x-ray photoelectron spectroscopy analyses revealed that the functional groups (–SH or –NH₂) were successfully grafted onto the diatom silica surface. The kinetics and efficiency of Hg(II) adsorption were markedly improved by the chemical functionalization of diatom microparticles. The relationship among the type of functional groups, pH and adsorption efficiency of mercury ions was established. The Hg(II) adsorption reached equilibrium within 60 min with maximum adsorption capacities of 185.2, 131.7 and 169.5 mg g⁻¹ for particles functionalized with MPTMS, APTES and AEAPTMS, respectively. The adsorption behavior followed a pseudo-second-order reaction model and Langmuirian isotherm. These results show that mercapto- or amino-functionalized diatom microparticles are promising natural, cost-effective and environmentally benign adsorbents suitable for the removal of mercury ions from aqueous solutions.