Three-channel false colour AFM images for improved interpretation of complex surfaces: A study of filamentous cyanobacteria

Imaging signals derived from the atomic force microscope (AFM) are typically presented as separate adjacent images with greyscale or pseudo-colour palettes. We propose that information-rich false-colour composites are a useful means of presenting three-channel AFM image data. This method can aid the interpretation of complex surfaces and facilitate the perception of information that is convoluted across data channels. We illustrate this approach with images of filamentous cyanobacteria imaged in air and under aqueous buffer, using both deflection-modulation (contact) mode and amplitude-modulation (tapping) mode. Topography-dependent contrast in the error and tertiary signals aids the interpretation of the topography signal by contributing additional data, resulting in a more detailed image, and by showing variations in the probe-surface interaction. Moreover, topography-independent contrast and topography-dependent contrast in the tertiary data image (phase or friction) can be distinguished more easily as a consequence of the three dimensional colour-space.     

The ecological history of Lake Erie as recorded by the phytoplankton community

Lake Erie's water quality has fluctuated since European settlement due to cultural eutrophication and the effects of invasive species. Our attempts to understand the cause-and-effect linkages between observed ecosystem changes and various stressors are evolving. Non-indigenous species, pollutants, land-use and climate change that can alter a lake's physical and chemical environment can manifest rapid changes in community composition and abundance of phytoplankton. As such, for many decades researchers have used phytoplankton data from Lake Erie to track environmental changes. We provide a chronological account of previous and ongoing assessments of pelagic algae to summarize past and present environmental conditions of Lake Erie. This review necessarily focuses on diatom-based assessments as their preserved remains in sediments have been used to hind-cast human-induced impacts and recovery. Because of their uniqueness, this review summarizes where possible the long-term trends according to the western, central and eastern lake basins. Overall, this historical assessment summarizes a period of significant eutrophication throughout most of the 20th century, followed by water quality improvement due to nutrient reductions and establishment of filter-feeding dreissenids. Recent data suggest new issues associated with blooms of diatoms and blue-green algae. The challenges facing Lake Erie underline the need for continued monitoring and evaluation of historical records that will help us distinguish natural from anthropogenic changes, and to reveal the causes and extent of environmental insults in order to make management decisions.     

A novel method for tracking western Lake Erie Microcystis blooms, 2002–2011

After a period of improvement from the late 1970s through the mid 1990s, western Lake Erie has returned to eutrophic conditions and harmful algal blooms now dominated by the cyanobacterium Microcystis aeruginosa. The detection of long-term trends in Microcystis blooms would benefit from a convenient method for quantifying Microcystis using archived plankton tows. From 2002 to 2011, summer Microcystis blooms in western Lake Erie were quantified using plankton tows (N = 649). A flotation separation method was devised to quantify Microcystis biovolume in the tows, and the method was tested against whole water cell counts. Floating Microcystis biovolume (mL) in preserved tows was highly correlated with total Microcystis cells (R² = 0.84) and biomass (R² = 0.95) in whole water samples. We found that Microcystis annual biovolume was highly variable among years; the 2011 bloom was 2.4 times greater than the second largest bloom (2008) and 29.0 times greater than the smallest bloom (2002). Advantages of the method include use of archived samples, high sampling volume, and low effort and expense. Limitations include specificity for cyanobacterial blooms dominated by large Microcystis colonies and the need for site-specific validation. This study indicates that the flotation method can be used to rapidly assess past and present Microcystis in western Lake Erie and that there was high variability in the timing, duration, and intensity of the annual Microcystis blooms over a 10-year period. The data made possible by this method will aid further investigations into the underlying causal factors of blooms.     

An analysis of satellite-derived chlorophyll and algal bloom indices on Lake Winnipeg

Lake Winnipeg has experienced dramatic increases in nutrient loading and phytoplankton biomass over the last few decades, accompanied by a marked shift in community composition towards the dominance of cyanobacteria. Comprehensive lake-wide observations of algal blooms are critical to assessing the lake's health status, its response to nutrient management practices, and an improved understanding of the processes driving blooms. We present an analysis of the spatial and temporal variability of algal blooms on Lake Winnipeg using satellite-derived chlorophyll and indices for algal bloom intensity, spatial extent, severity, and duration over the period of ESA's MERIS mission (2002–2011). Imagery documented extensive blooms covering as much as 93% of the lake surface. Bloom conditions were analysed in the context of in-lake and watershed processes to gain further insight on the drivers of bloom events. Day to day bloom variability was driven primarily by intermittent wind mixing events, with quiescent periods leading to the formation of dense surface blooms. Seasonal bloom distribution was consistent with light limitation in the south basin and lake circulation transporting bloom material towards the north-east shore. Inter-annual variability in average bloom severity was related to both total phosphorus (TP) loadings and summer lake surface temperatures. Results provide a valuable historical time series of bloom conditions to which ongoing observations from Sentinel-3's OLCI sensor can be added for longer term monitoring and change detection.     

Application of Aqueous Two‐Phase Systems for the Potential Extractive Fermentation of Cyanobacterial Products

The potential use of aqueous two‐phase systems (ATPS) to establish a viable protocol for the in situ recovery of cyanobacterial products was evaluated. The evaluation of system parameters such as poly (ethylene glycol) (PEG) molecular mass, concentration of PEG and salt was carried out to determine the conditions under which Synechocystis sp. PCC 6803 cell and cyanobacterial products, i.e., β‐carotene and lutein, become concentrated in opposite phases. PEG‐phosphate ATPS proved to be unsuitable for the recovery of cyanobacterial products due to the negative effect of the salt upon the cell growth. The use of ATPS PEG‐dextran (6.6 % w/w PEG 3350, 8.4 % w/w dextran 66900, TLL 17.3 % w/w, V_R 1.0, pH 7) and (4.22 % w/w PEG 8000, 9.77 % w/w dextran 66900, TLL 18 % w/w, V_R 1.0, pH 7) resulted in the growth of cyanobacteria (Synechocystis sp. PCC 6803) and the concentration of lutein in opposite phases. However, β‐carotene was seen to concentrate in the top phase together with the biomass. The results reported here demonstrate the potential application of ATPS to establish the conditions for an extractive fermentation prototype process for the recovery of cyanobacterial products.     

Influence of sampling strategies on the monitoring of cyanobacteria in shallow lakes: lessons from a case study in France

Sampling cyanobacteria in freshwater ecosystems is a crucial aspect of monitoring programs in both basic and applied research. Despite this, few papers have dealt with this aspect, and a high proportion of cyanobacteria monitoring programs are still based on monthly or twice-monthly water sampling, usually performed at a single location. In this study, we conducted high frequency spatial and temporal water sampling in a small eutrophic shallow lake that experiences cyanobacterial blooms every year. We demonstrate that the spatial and temporal aspects of the sampling strategy had a considerable impact on the findings of cyanobacteria monitoring in this lake. In particular, two peaks of Aphanizomenon flos-aquae cell abundances were usually not picked up by the various temporal sampling strategies tested. In contrast, sampling once a month was sufficient to provide a good overall estimation of the population dynamics of Microcystis aeruginosa. The spatial frequency of sampling was also important, and the choice in the location of the sampling points around the lake was very important if only two or three sampling points were used. When four or five sampling points were used, this reduced the impact of the choice of the location of the sampling points, and allowed to obtain fairly similar results than when six sampling points were used. These findings demonstrate the importance of the sampling strategy in cyanobacteria monitoring, and the fact that it is impossible to propose a single universal sampling strategy that is appropriate for all freshwater ecosystems and also for all cyanobacteria.     

Controlling harmful cyanobacterial blooms in a hyper-eutrophic lake (Lake Taihu, China): the need for a dual nutrient (N & P) management strategy

Harmful cyanobacterial blooms, reflecting advanced eutrophication, are spreading globally and threaten the sustainability of freshwater ecosystems. Increasingly, non-nitrogen (N₂)-fixing cyanobacteria (e.g., Microcystis) dominate such blooms, indicating that both excessive nitrogen (N) and phosphorus (P) loads may be responsible for their proliferation. Traditionally, watershed nutrient management efforts to control these blooms have focused on reducing P inputs. However, N loading has increased dramatically in many watersheds, promoting blooms of non-N₂ fixers, and altering lake nutrient budgets and cycling characteristics. We examined this proliferating water quality problem in Lake Taihu, China’s 3rd largest freshwater lake. This shallow, hyper-eutrophic lake has changed from bloom-free to bloom-plagued conditions over the past 3 decades. Toxic Microcystis spp. blooms threaten the use of the lake for drinking water, fisheries and recreational purposes. Nutrient addition bioassays indicated that the lake shifts from P limitation in winter-spring to N limitation in cyanobacteria-dominated summer and fall months. Combined N and P additions led to maximum stimulation of growth. Despite summer N limitation and P availability, non-N₂ fixing blooms prevailed. Nitrogen cycling studies, combined with N input estimates, indicate that Microcystis thrives on both newly supplied and previously-loaded N sources to maintain its dominance. Denitrification did not relieve the lake of excessive N inputs. Results point to the need to reduce both N and P inputs for long-term eutrophication and cyanobacterial bloom control in this hyper-eutrophic system.     

Thermochemical liquefaction characteristics of Cyanobacteria in subcritical and supercritical ethanol–water mixture

The thermochemical liquefaction of Cyanobacteria in subcritical and supercritical ethanol–water mixture was studied with different reaction temperature, reaction time, solvent composition, and solid–liquid ratio. Highest bio‐oil yield of 42.5% containing mainly fatty acid ethyl esters, phenols, pyrrolidinones, and pyridinols was obtained in ethanol–water mixture (4/6, v/v) at temperature of 320°C for 30 min, with solid–liquid ratio of 1 g/15 mL. Both solvent composition and supercritical state had great influence on the liquefaction of Cyanobacteria, while the synergetic effects of water and ethanol in co‐solvents were again verified. Copyright © 2017 John Wiley & Sons, Ltd.     

Hydrogen production from phototrophic microorganisms: Reality and perspectives

Hydrogen is a promising alternative to fossil fuel for a source of clean energy due to its high energy content. Some strains of phototrophic microorganisms are known as important object of scientific research and they are being explored to raise biohydrogen (BioH₂) yield. BioH₂ is still not commonly used in industrial area because of the low biomass yield and valuable down streaming process. This article deals with the methods of the hydrogen production with the help of two large groups of phototrophic microorganisms – microalgae and cyanobacteria. Microalgal hydrogen is environmentally friendly alternative to conventional fossil fuels. Algal biomass has been considered as an attractive raw source for hydrogen production. Genetic modified strains of cyanobacteria are used as a perspective object for obtaining hydrogen. The modern photobioreactors and outdoor air systems have been used to obtain the biomass used for hydrogen production. At present time a variety of immobilization matrices and methods are being examined for their suitability to make immobilized H₂ producers.