Review: the latest advances in biomedical applications of chitosan hydrogel as a powerful natural structure with eye-catching biological properties

Journal of Materials Science - Chitosan is one of the natural cationic polymers with unique properties such as non-toxicity, biodegradability, biocompatibility, environmentally friendly that has...     

Low Temperature Characteristics of the Metal–Superconductor NIS Tunneling Thermometer

We discuss the temperature dependence of a common low temperature local thermometer, a tunnel junction between a superconductor and a normal metal (NIS junction). Towards the lowest temperatures its characteristics tend to saturate, which is usually attributed to selfheating effects. In this technical note, we reanalyze this saturation and show that the temperature independent subgap current of the junction alone explains in some cases the low temperature behavior quantitatively.

     

A hybrid knowledge and ensemble classification approach for prediction of venous thromboembolism

Clinical narratives such as progress summaries, lab reports, surgical reports, and other narrative texts contain key biomarkers about a patient's health. Evidence-based preventive medicine needs accurate semantic and sentiment analysis to extract and classify medical features as the input to appropriate machine learning classifiers. However, the traditional approach of using single classifiers is limited by the need for dimensionality reduction techniques, statistical feature correlation, a faster learning rate, and the lack of consideration of the semantic relations among features. Hence, extracting semantic and sentiment-based features from clinical text and combining multiple classifiers to create an ensemble intelligent system overcomes many limitations and provides a more robust prediction outcome. The selection of an appropriate approach and its interparameter dependency becomes key for the success of the ensemble method. This paper proposes a hybrid knowledge and ensemble learning framework for prediction of venous thromboembolism (VTE) diagnosis consisting of the following components: a VTE ontology, semantic extraction and sentiment assessment of risk factor framework, and an ensemble classifier. Therefore, a component-based analysis approach was adopted for evaluation using a data set of 250 clinical narratives where knowledge and ensemble achieved the following results with and without semantic extraction and sentiment assessment of risk factor, respectively: a precision of 81.8% and 62.9%, a recall of 81.8% and 57.6%, an F measure of 81.8% and 53.8%, and a receiving operating characteristic of 80.1% and 58.5% in identifying cases of VTE.     

Sarcoplasmic reticular Ca2+ pump ATPase activity in congestive heart failure due to myocardial infarction

OBJECTIVE: Earlier studies have shown a depression in the sarcoplasmic reticular (SR) Ca2+ uptake and gene expression in Ca2+ pump ATPase protein in congestive heart failure subsequent to myocardial infarction. It is the objective of this study to understand further the mechanisms of depressed SR Ca2+ pump activity in the failing heart. METHODS: Heart failure in rats was induced by occluding the left coronary artery for 16 weeks and the viable left ventricle was processed for the isolation of SR membranes. Sham-operated animals were used as control. The characteristics of SR Ca2+ pump ATPase in the presence of different concentrations of K+, Ca2+ and ATP were examined and the purity of these membranes was monitored by determining the marker enzyme activities. In addition to measuring changes in cyclic adenosine monophosphate (cAMP) protein kinase and Ca(2+)-calmodulin induced phosphorylation, alterations in SR phospholipid composition as well as sulfhydryl (SH) group content were investigated. RESULTS: Ca(2+)-stimulated ATPase activity, unlike Mg(2+)-ATPase activity, was depressed in the left ventricular SR from failing hearts as compared to control. The decrease in Ca(2+)-stimulated ATPase activity was seen at different concentrations of Ca2+, K+ and ATP but no changes in the affinities of the enzyme for Ca2+ and ATP were evident. The SR Ca(2+)-stimulated ATPase activities in the presence of both cAMP-dependent protein kinase and Ca(2+)-calmodulin were markedly decreased in the failing hearts when compared to control preparations. Furthermore, the 32P incorporation in the presence of cAMP-dependent protein kinase or Ca(2+)-calmodulin was also reduced in the experimental heart SR membranes. The phospholipid composition of the SR membranes from the failing heart was markedly altered. No changes in SH-group or the degree of cross contamination with other membranes were apparent in the failing heart SR. CONCLUSIONS: These results suggest that abnormalities in membrane phospholipid composition and phosphorylation of the enzyme may partly explain the observed depression in SR Ca2+ pump ATPase activity in heart failure following myocardial infarction.     

Real-time processing and compression of DNA microarray images.

In this paper, we present a pipeline architecture specifically designed to process and compress DNA microarray images. Many of the pixilated image generation methods produce one row of the image at a time. This property is fully exploited by the proposed pipeline that takes in one row of the produced image at each clock pulse and performs the necessary image processing steps on it. This will remove the present need for sluggish software routines that are considered a major bottleneck in the microarray technology. Moreover, two different structures are proposed for compressing DNA microarray images. The proposed architecture is proved to be highly modular, scalable, and suited for a standard cell VLSI implementation.     

Robust control of polytopic systems by convex optimization

Robust control synthesis of linear time-invariant SISO polytopic systems is investigated using the polynomial approach. A convex set of all stabilizing controllers for a polytopic system is given over an infinite-dimensional space. A finite-dimensional approximation of this set is obtained using the orthonormal basis functions and represented by a set of LMIs thanks to the KYP lemma. Then, an LMI based convex optimization problem for robust pole placement with sensitivity function shaping in two- and infinity-norm is proposed. The simulation results show the effectiveness of the proposed method.     

Autonomous mapping of HL7 RIM and relational database schema

Healthcare systems need to share information within and across the boundaries in order to provide better care to the patients. For this purpose, they take advantage of the full potential of current state of the art in healthcare standards providing interoperable solutions. HL7 V3 specification is an international message exchange and interoperability standard. HL7 V3 messages exchanged between healthcare applications are ultimately recorded into local healthcare databases, mostly in relational databases. In order to bring these relational databases in compliance with HL7, mappings between HL7 RIM (Reference Information Model) and relational database schema are required. Currently, RIM and database mapping is largely performed manually, therefore it is tedious, time consuming, error prone and expensive process. It is a challenging task to determine all correspondences between RIM and schema automatically because of extreme heterogeneity issues in healthcare databases. To reduce the amount of manual efforts as much as possible, autonomous mapping approaches are required. This paper proposes a technique that addresses the aforementioned mapping issue and aligns healthcare databases to HL7 V3 RIM specifications. Furthermore, the proposed technique has been implemented as a working application and tested on real world healthcare systems. The application loads the target healthcare schema and then identifies the most appropriate match for tables and the associated fields in the schema by using domain knowledge and the matching rules defined in the Mapping Knowledge Repository. These rules are designed to handle the complexity of semantics found in healthcare databases. The GUI allows users to view and edit/re-map the correspondences. Once all the mappings are defined, the application generates Mapping Specification, which contains all the mapping information i.e. database tables and fields with associated RIM classes and attributes. In order to enable the transactions, the application is facilitated with the autonomous code generation from the Mapping Specification. The Code Generator component focuses primarily on generating custom classes and hibernate mapping files against the runtime system to retrieve and parse the data from the data source—thus allows bi-directional HL7 to database communication, with minimum programming required. Our experimental results show 35–65% accuracy on real laboratory systems, thus demonstrating the promise of the approach. The proposed scheme is an effective step in bringing the clinical databases in compliance with RIM, providing ease and flexibility.     

Adaptive synchronization of master–slave systems with mixed neutral and discrete time‐delays and nonlinear perturbations

This paper investigates the delay‐dependent adaptive synchronization problem of the master and slave structure of linear systems with both constant neutral and time‐varying discrete time‐delays and nonlinear perturbations based on the Barbalat lemma and matching conditions. An adaption law which includes the master‐slave parameters is obtained by using the Lyapunov functional method and inequality techniques to synchronize the master‐slave systems without the knowledge of upper bounds of perturbation terms. Particularly, it is shown that the synchronization speed can be controlled by adjusting the update gain of the synchronization signal. A numerical example has been given to show the effectiveness of the method. Copyright © 2011 John Wiley and Sons Asia Pte Ltd and Chinese Automatic Control Society     

A localization algorithm for large scale mobile wireless sensor networks: a learning approach

Localization is a crucial problem in wireless sensor networks and most of the localization algorithms given in the literature are non-adaptive and designed for fixed sensor networks. In this paper, we propose a learning based localization algorithm for mobile wireless sensor networks. By this technique, mobility in the network will be discovered by two crucial methods in the beacons: position and distance checks methods. These two methods help to have accurate localization and constrain communication just when it is necessary. The proposed method localizes the nodes based on connectivity information (hop count), which doesn’t need extra hardware and is cost efficient. The experimental results show that the proposed algorithm is scalable with a small set of beacons in large scale network with a high density of nodes. The given algorithm is fast and free from a pre-deployment requirement. The simulation results show the high performance of the proposed algorithm.