Fast Envelope Detection for Thinned Display of Finely Digitized Ultrasound Scans

In ultrasound tissue characterization, the backscattered RF signal is finely digitized. The signal envelope is displayed in a version thinned 1-8. Three implementations of Hilbert-transform envelope detection with thinning were timed. An array processor speeds up DFT implementation by a factor of 2.5, but convolution implementation is even faster.     

Phase equilibria of crude oils using the continuous thermodynamics approach

This paper deals with the application of continuous thermodynamics to light and heavy oil systems using the Peng- Robinson equation of state. The composition of the high molar mass components in a reservoir oil is described by a continuous distribution function of some characterizing quantity, e.g. molar mass or boiling temperature. Numerical Gaussian quadrature methods are used to generate pseudo-components and their mole fractions from distribution data. Several examples are presented for phase equilibria of solvent/crude oil systems. The results showed that semi-infinite distribution functions, such as the Γ function, cannot be applied to all cases, e.g. dew point calculations. The Gauss- Legendre quadrature method coupled with spline fitting worked best for heavy oil systems.     

SPRINT II: a second generation single photon ring tomograph

SPRINT II is a stationary detector ring tomograph designed for brain imaging. Eleven two-dimensional sodium iodide camera modules that use maximum-likelihood position logic are arranged in a 50-cm-diameter ring with a scintillator packing fraction of 96%. A 34-cm-diameter rotating lead aperture ring containing either 10 or 12 slits is used for in-plane collimation, while the z-axis collimator is constructed of parallel lead foil rings. The field of view is 22 cm in diameter by 12 cm long. Sensitivity is 10 count/s/muCi for an on-axis (99m)Tc point source and 8500 count/s/muCi/cm(3) for 19.8-cm-diameter by 6.2-cm-long cylindrical source. Longitudinal resolution is 10 mm FWHM, and in-plane resolution varies from 8 mm FWHM on-axis to 5 mm FWHM at a radius of 9 cm. Performance results are presented.     

A regularized deconvolution-fitting method for Compton-scatter correction in SPECT

A method is presented for estimating the Compton-scatter component within the photopeak for local energy spectra measured by an Anger camera in SPECT. Assuming that the measured energy spectrum is the source scatter energy distribution convolved with a known camera energy-resolution function plus an unscattered spectral component, a least-square inverse operation is performed to recover the source scatter distribution. Since this inverse operation is ill-posed, the regularization technique is applied for stabilization. With the method, scatter fractions similar to those from polynomial spectral fitting (PSF) have been observed for experimentally measured, high-count data with a hot (Tc(99m) or I(131)) sphere in a cold cylinder, and the inverse (Tc(99m) only). The method is also less sensitive to the width of the fitting window. A regularization parameter from 1 to 10 is recommended for practical cases. The shape of a recovered source scatter distribution matches that determined by a high-resolution semiconductor-detector measurement as well as by Monte Carlo simulation.     

A parallel Monte Carlo code for planar and SPECT imaging: implementation, verification and applications in (131)I SPECT.

This paper reports the implementation of the SIMIND Monte Carlo code on an IBM SP2 distributed memory parallel computer. Basic aspects of running Monte Carlo particle transport calculations on parallel architectures are described. Our parallelization is based on equally partitioning photons among the processors and uses the Message Passing Interface (MPI) library for interprocessor communication and the Scalable Parallel Random Number Generator (SPRNG) to generate uncorrelated random number streams. These parallelization techniques are also applicable to other distributed memory architectures. A linear increase in computing speed with the number of processors is demonstrated for up to 32 processors. This speed-up is especially significant in Single Photon Emission Computed Tomography (SPECT) simulations involving higher energy photon emitters, where explicit modeling of the phantom and collimator is required. For (131)I, the accuracy of the parallel code is demonstrated by comparing simulated and experimental SPECT images from a heart/thorax phantom. Clinically realistic SPECT simulations using the voxel-man phantom are carried out to assess scatter and attenuation correction.     

Fatty acid profile and proximate composition of Pacific mullet (Mugil so‐iuy) caught in the Black Sea

This study demonstrates proximate composition and fatty acid profile of Pacific mullet caught in Turkey. The highest moisture and protein contents were observed with muscle tissues as 83.74 and 10.52%, while the highest fat and ash contents were attributed to female gonads as 11.80 and 0.94%, respectively, with a significant variation amongst months (P < 0.05). Significant variation (P < 0.05) usually occurred amongst months within the same sex for total saturated fatty acids ( ∑ SFA), monosaturated fatty acids ( ∑ MUFA), polyunsaturated fatty acids ( ∑ PUFA), eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) in muscle, although overall mean values between sexes were not found significant. Except for EPA, no variation observed for gonads while significant changes occurred (P < 0.05) with liver samples amongst months. Overall total values of ∑ SFA, ∑ MUFA, ∑ PUFA, DHA and EPA in muscle samples were 29.59, 29.26, 18.06 and 4.48%, respectively, while in gonads ranged as 30.26–33.23%, 35.17–37.47%, 11.87–14.88%, 4.38–5.34% and 3.02–5.02%. These FAs were 21.57–33.11%, 32.89–50.96%, 14.78–20.08%, 0.89–9.94% and 5.85–9.54% for liver, respectively. The results of this study showed that muscle and gonads of Pacific mullet were rich in n‐3 PUFA, especially, EPA, DHA, increasing the value of this species for human consumption.     

Commercial test kits and the determination of histamine in traditional (ethnic) fish products-evaluation against an EU accepted HPLC method

Although commercial test kits are generally used and/or evaluated for determining histamine in fresh and canned fish, and fish meal, there is little information on their performance and the application for traditional fish products (TFPs), which generally differ in product properties. In this study, three quantitative (Food EIA, Veratox, Histaquant) and four qualitative (Histasure, Histameter, Transia qualitative and semi-quantitative) commercial histamine test kits were evaluated against HPLC method for detecting histamine in several traditional fish products. Among the quantitative kits, Histamine Food EIA showed the best correlation with HPLC method for TFPs (R² = 0.9132) as well as good recoveries ranging between 89 (±4.11)% and 117 (±1.50)%. Although good recoveries were also observed with Veratox kit, poor correlation was found with HPLC. Poor correlation and low recoveries were also observed with Histaquant. Histasure and Transia tube histamine kits showed good agreement with HPLC results. However, the detection limit for Transia qualitative kit is 100 ppm, and for Histasure and Transia semi-quantitative kits can be set to 50 ppm. Therefore, Histasure and Transia semi-quantitative kits are found more suitable for either HACCP monitoring histamine in seafood processing plants or regulatory purposes according to Food Drug and Administration (FDA) legislation for TFPs. However, Transia semi-quantitative kit should be used in caution for histamine cut off values <50 ppm. This study shows that each test kit can represent different performance for determining histamine in TFPs according to product type, and therefore new commercial test kits should be evaluated against an approved analytical method before applications in future for these types of products.     

Changes during fishing season in the fat content and fatty acid profile of edible muscle,liver and gonads of anchovy (Engraulis encrasicolus) caught in the Turkish Black Sea

This study aimed to determine the fat content and fatty acid (FA) composition of anchovy (Engraulis encrasicolus, Linnaeus, 1758) in their edible muscle, liver and gonad during the catching season (between September 2008 and April 2009) in The Black Sea Region, Turkey. The most abundant FAs in all samples were palmitic acid (ranged as 15.93–27.34%) amongst saturated fatty acids (SFAs), oleic acid (10.72–21.37%) amongst monounsaturated fatty acids, eicosapentaenoic acid (EPA) (5.28–14.11%) and docosahexaenoic acid (DHA) (9.83–22.34%) amongst polyunsaturated fatty acids (PUFAs). At the beginning of winter, significant increase in edible muscle and liver’s PUFAs and ∑n3/∑n6 were observed (P < 0.05). The highest contents of ∑PUFAs for muscle and liver were observed in January as 38.52% and 38.82%, respectively, while highest n3/n6 ratios were found in April as 10.13% for muscle and in January for liver samples as 9.15%. This study indicates that anchovy is a good nutritional source for human consumption with high contents of omega 3 fatty acids, particularly during winter. In November, about 130 g of anchovy edible meat is found to be in the satisfactory level for EPA + DHA according to the recommended weekly requirement.