Infectious disease and sociodemographic characteristics of foreign immigrants in the Central Penitentiary for Men in Barcelona

A number of thrombin mutants have been constructed to investigate the role of Trp96 and the beta-insertion loop for the specificity of thrombin. Thrombin(60D) consists of the replacement of the beta-insertion loop (14 amino acid residues from 59 to 63, including a 9-residue insertion at position 60) with the corresponding four residues in trypsin, Tyr-Lys-Ser-Gly; thrombin(GGG) is a smaller loop mutation in which the residues Tyr(60A)Pro(60B)Pro(60C)Trp(60D) Asp(60E)Lys(60F) of the beta-insertion loop were replaced by Gly-Gly-Gly; thrombin(96S) consists of a point mutation Trp96 --> Ser; and thrombin(GGG/96S) is the double mutant incorporating both changes. Thrombin(96S) clots fibrinogen approximately 3 times more slowly than thrombin, with the two beta-insertion loop mutants, thrombin(GGG) and thrombin(GGG/96S), reacting approximately 3000- and 1300-fold more slowly, respectively. The specificity constant kcat/Km for the cleavage of fibrinopeptide A and fibrinopeptide B by thrombin(96S) was 2.6 and 0.35 microM(-1) s(-1), respectively, compared to 10 and 2.5 microM(-1) s(-1) for wild-type recombinant thrombin, respectively. Kinetic constants were determined for the hydrolysis of H-D-phenylalanyl-L-pipecolyl-L-arginine-p-nitroaniline. The Michaelis constant Km increased approximately 6-fold for thrombin(96S) and >200-fold for thrombin(GGG) and thrombin(GGG/96S) when compared to wild-type recombinant thrombin, while the catalytic constant kcat remained approximately the same. All mutants were more susceptible to inhibition by BPTI than wild-type recombinant thrombin. Clearly, the beta-insertion loop is important for thrombin activity. But the mutation of Trp96 --> Ser can compensate somewhat for the loss of binding at the beta-insertion loop. The deletion of the hydrophobic interaction between Trp96 and Pro(60B)Pro(60C) appears to decrease the stability of the beta-insertion loop, thereby causing a decrease in binding efficiency.     

Water Quality Assessment of the Santiago River and Attenuation Capacity of Pollutants Downstream Guadalajara City,Mexico

The Santiago River in Mexico has been seriously polluted because of rapid urbanization and industrialization activities, lacking of appropriate planning and contamination monitoring policies. This research characterized the river water quality and recognizes some overall pollution sources, using two different information references: a dataset of 5 years from the Jalisco State Water Commission and a 14‐year dataset from the National Water Commission. Two zones have been identified as the main sources of pollution (hotspots), where the major events of urban and industrial wastewater discharges occur: (i) the urban fringe of Guadalajara city, with special emphasis in its southern area (nearby the so‐called El Ahogado stream) and (ii) downstream of Guadalajara City. Nevertheless, we have recognized some areas along the Santiago River where significant reduction of pollutants concentration takes place, possibly due to dilution by the inflow of tributaries and to the rainfall increasing. In addition, it is likely that hydropower dams are positively influencing the retention of pollutants along the river. In the lower zone, the water concentrations of O₂ are consistently above acceptable levels (up to 5 mg L^?1), and the majority of the pollution indicators parameters are below the maximum permissible values, despite the high pollution in Guadalajara area. This paper attempts to offer a methodological approach for a more accurate assessment of the river water quality and may assist in interpreting the sampling results derived from the regular monitoring, conducted by the state water authorities, while emphasizing the natural attenuation capacity of the Santiago River. Copyright © 2015 John Wiley & Sons, Ltd.     

Distribution of doses received by Cuban population due to environmental sources of radioactivity

Doses received by Cuban population due to exposure to the environmental sources of radiation were studied for their evaluation. Estimations of doses from the different components of the total dose were obtained and published. From the results obtained estimations of total doses to Cuban population from environmental radiation sources and the contributions of different dose components were made. A Monte Carlo simulation of the sum of doses was carried out and the distribution of obtained values was assumed as a lognormal distribution. Parameters for characterisation of this lognormal distribution were estimated, and on the basis of the estimations the average total effective dose to the Cuban population owing to exposure to the environmental sources was estimated as 1.1 +/- 0.3 mSv y(-1). This low dose value is in the range of doses estimated by UNSCEAR for world population due to natural background and can be explained by the specifics of the Cuban environment.     

Mechanism of phospholipid binding by the C2A-domain of synaptotagmin I

Synaptotagmin I is a synaptic vesicle membrane protein that probably functions as a Ca2+ sensor in neurotransmitter release and contains two C2-domains which bind Ca2+. The first C2-domain of synaptotagmin I (the C2A-domain) binds phospholipids in a Ca2+-dependent manner similar to that of the C2-domains of protein kinase C, cytoplasmic phospholipase A2, and phospholipase Cdelta1. Although the tertiary structure of these C2-domains is known, the molecular basis for their Ca2+-dependent interactions with phospholipids is unclear. We have now investigated the mechanisms involved in Ca2+-dependent phospholipid binding by the C2A-domain of synaptotagmin I. Our data show that the C2A-domain binds negatively charged liposomes in an electrostatic interaction that is determined by the charge density of the liposome surface but not by the phospholipid headgroup. At the tip of the C2A-domain, three tightly clustered Ca2+-binding sites are formed by five aspartates and one serine. Mutations in these aspartate and serine residues demonstrated that all three Ca2+-binding sites are required for phospholipid binding. The Ca2+ binding sites at the top of the C2A-domain are surrounded by positively charged amino acids that were shown by mutagenesis to be also involved in phospholipid binding. Our results yield a molecular picture of the interactions between a C2-domain and phospholipids. Binding is highly electrostatic and occurs between the surfaces of the phospholipid bilayer and of the tip of the C2A-domain. The data suggest that the negatively charged phospholipid headgroups interact with the basic side chains surrounding the Ca2+-binding sites and with bound Ca2+ ions, thereby filling empty coordination sites and increasing the apparent affinity for Ca2+. In addition, insertion of hydrophobic side chains may contribute to phospholipid binding. This model is likely to be general for other C2-domains, with the relative contributions of electrostatic and hydrophobic interactions dictated by the exposed side chains surrounding the Ca2+-binding region.     

1H and 15N resonance assignments and secondary structure of cellular retinoic acid-binding protein with and without bound ligand

Sequence-specific assignments for the 1H and 15N backbone resonances of cellular retinoic acid-binding protein (CRABP), with and without the bound ligand, have been obtained. Most of the side-chain resonances of both apo- and holo-CRABP have also been assigned. The assignments have been obtained using two-dimensional homonuclear and heteronuclear NMR data, and three-dimensional 1H-15N TOCSY-HMQC and NOESY-HMQC experiments. The secondary structure, deduced from nuclear Overhauser effects, amide H/D exchange rates and H alpha chemical shifts, is analogous in both forms of the protein and is completely consistent with a model of CRABP that had been constructed by homology with the crystal structure of myelin P2 protein [Zhang et al. (1992) Protein Struct. Funct. Genet., 13, 87-99]. This model comprises two five-stranded beta-sheets that form a sandwich or beta-clam structure, and a short N-terminal helix-turn-helix motif that closes the binding cavity between the two sheets. Comparison of the data obtained for apo- and holo-CRABP indicates that a region around the C-terminus of the second helix is much more flexible in the apo-protein. Our data provide experimental evidence for the hypothesis that the ligand-binding mechanism of CRABP, and of other homologous proteins that bind hydrophobic ligands in the cytoplasm, involves opening of a portal to allow entry of the ligand into the cavity.     

Noncontact fluorescence diffuse optical tomography of heterogeneous media

Fluorescence-enhanced diffuse optical tomography is expected to be useful to the collection of functional information from small animal models. This technique is currently limited by the extent of tissue heterogeneity and management of the shape of the animals. We propose an approach based on the reconstruction of object heterogeneity, which provides an original solution to the two problems. Three evaluation campaigns are described: the first two were performed on phantoms designed to test the reconstructions in highly heterogeneous media and noncontact geometries; the third was conducted on mice with lung tumors to test fluorescence yield reconstruction feasibility in vivo.     

On searching for an optimal threshold for morphological image segmentation

Segmentation of images represents the first step in many of the tasks that pattern recognition or computer vision has to deal with. Therefore, the main goal of our paper is to describe a new method for image segmentation, taking into account some Mathematical Morphology operations and an adaptively updated threshold, what we call Morphological Gradient Threshold, to obtain the optimal segmentation. The key factor in our work is the calculation of the distance between the segmented image and the ideal segmentation. Experimental results show that the optimal threshold is obtained when the Morphological Gradient Threshold is around the 70% of the maximum value of the gradient. This threshold could be computed, for any new image captured by the vision system, using a properly designed binary metrics.     

Polymerization of lactams, 43. Hydrolytic copolymerization of 6-caprolactam with 12-dodecanelactam

The copolymerization of 6-caprolactam with 12-dodecanelactam with 2 mol-% 6-aminocaproic acid as the initiator was investigated at 260°C within a broad concentration range of both comonomers. With increasing content of 12-dodecanelactam in the initial mixture the equilibrium content of the copolymer increased and the rate of copolymerization decreased. In the initial stage of copolymerization 12-dodecanelactam disappeared very quickly from the initial mixture; it was not incorporated into the copolymer directly, but through oligomers, probably through a cyclic dimer. The effect of temperature on the copolymerization process was examined for an equimolar composition of the initial mixture. It was demonstrated that starting with the polymerization temperature of 260°C, the copolymers underwent degradation on long-termin heating. At 280°C, degradation occured already after 50 h of polymerization. The apparent activation energy of copolymerization, 62 kJ/mol, was calculated from the temperature dependence.