FPGA Architecture for 2D Discrete Fourier Transform Based on 2D Decomposition for Large-sized Data

Applications based on Discrete Fourier Transforms (DFT) are extensively used in several areas of signal and digital image processing. Of particular interest is the two-dimensional (2D) DFT which is more computation- and bandwidth-intensive than the one-dimensional (1D) DFT. Traditionally, a 2D DFT is computed using Row-Column (RC) decomposition, where 1D DFTs are computed along the rows followed by 1D DFTs along the columns. Both application specific and reconfigurable hardware have utilized this scheme for high-performance implementations of 2D DFT. However, architectures based on RC decomposition are not efficient for large input size data due to memory bandwidth constraints. In this paper, we propose an efficient architecture to implement 2D DFT for large-sized input data based on a novel 2D decomposition algorithm. This architecture achieves very high throughput by exploiting the inherent parallelism due to the algorithm decomposition and by utilizing the row-wise burst access pattern of the external memory. A high throughput memory interface has been designed to enable maximum utilization of the memory bandwidth. In addition, an automatic system generator is provided for mapping this architecture onto a reconfigurable platform of Xilinx Virtex-5 devices. For a 2K ×2K input size, the proposed architecture is 1.96 times faster than RC decomposition based implementation under the same memory constraints, and also outperforms other existing implementations.     

Saliva improves Streptococcus mitis protective effect on human gingival fibroblasts in presence of 2-hydroxyethyl-methacrylate

This study aimed to investigate the effect of saliva on Streptococcus mitis free cells and on S. mitis/human gingival fibroblasts (HGFs) co-culture model, in presence of 2-hydroxyethyl-methacrylate (HEMA). The bacterial aggregation both in the planktonic phase and on HGFs, as well as the apoptotic and necrotic eukaryotic cells amount were analyzed, in presence of saliva and/or HEMA. The aggregation test revealed a significant saliva aggregation effect on S. mitis strains compared to the untreated sample. No significant differences were recorded in the amount of culturable bacteria in all studied conditions; however, from microscopy images, the saliva/HEMA combining effect induced a significant bacterial aggregation and adhesion on HGFs. HEMA treatment decreased viable eukaryotic cell number with a parallel increment of necrotic cells, but when saliva was added to the co-culture, the viable cells percentage increased to a value comparable to the control sample.     

Lateral cysts and fistulas of the neck. Diagnosis and treatment

Lateral neck cysts and fistulae are considered to be a well-defined clinical entity which needs a precise knowledge of the development of the branchial system to have an appropriate and subsequent successful treatment. According to the recent classification cysts of I and II type and fistulae of I, II and III type can be recognized. In the former ultrasonography and Computerized Tomography represent the most appropriate diagnostic tools, while in the latter fistulography is preferred. An elective surgical excision seem to be resolutive in the majority of cases: on the contrary emergency surgery is related to a certain relapse of this pathology. 45 cases of branchial pathology are reported; diagnostic and therapeutic choices are then discussed.     

Volterra-Series-Based Distortion Analysis for Optimization of Out-of-Band Terminations in GaN HEMT Devices

This letter focuses on the critical device-level linearity issues resulting from out-of-band terminations for reliable distortion characterization in future Universal Mobile Telecommunications System-Long Term Evolution (UMTS-LTE). Using Volterra series technique, the key distortion sources arising from the envelope and harmonic components in 0.5-mm GaN HEMT were identified using commercial and in-house bias tees. With the designed in-house bias tee, the baseband performance, in comparison with the commercial bias tee, is tested through drain-bias sensing. In reference to the commercial bias tee, up to 99.3% reduction in drain modulation is achieved using the in-house bias tee. Memory-effect characterization of GaN HEMT exemplified the implications of baseband and second-harmonic load terminations, which was theoretically confirmed through Volterra series technique. Using the in-house bias tee, under two-carrier wideband code-division multiple-access excitation, up to 47-dBc 3rd-order intermodulation ratio (IMR3) is achieved at 13.5-dB backoff. This has resulted in a 5-dB IMR suppression together with the minimization of intermodulation-distortion asymmetry, confirming the possibility to achieve the 3rd Generation Partnership Project linearity specification at the device level.     

Proteomic Analysis of Marinesco–Sjogren Syndrome Fibroblasts Indicates Pro-Survival Metabolic Adaptation to SIL1 Loss

Marinesco–Sjogren syndrome (MSS) is a rare multisystem pediatric disorder, caused by loss-of-function mutations in the gene encoding the endoplasmic reticulum cochaperone SIL1. SIL1 acts as a nucleotide exchange factor for BiP, which plays a central role in secretory protein folding. SIL1 mutant cells have reduced BiP-assisted protein folding, cannot fulfil their protein needs, and experience chronic activation of the unfolded protein response (UPR). Maladaptive UPR may explain the cerebellar and skeletal muscle degeneration responsible for the ataxia and muscle weakness typical of MSS. However, the cause of other more variable, clinical manifestations, such as mild to severe mental retardation, hypogonadism, short stature, and skeletal deformities, is less clear. To gain insights into the pathogenic mechanisms and/or adaptive responses to SIL1 loss, we carried out cell biological and proteomic investigations in skin fibroblasts derived from a young patient carrying the SIL1 R111X mutation. Despite fibroblasts not being overtly affected in MSS, we found morphological and biochemical changes indicative of UPR activation and altered cell metabolism. All the cell machineries involved in RNA splicing and translation were strongly downregulated, while protein degradation via lysosome-based structures was boosted, consistent with an attempt of the cell to reduce the workload of the endoplasmic reticulum and dispose of misfolded proteins. Cell metabolism was extensively affected as we observed a reduction in lipid synthesis, an increase in beta oxidation, and an enhancement of the tricarboxylic acid cycle, with upregulation of eight of its enzymes. Finally, the catabolic pathways of various amino acids, including valine, leucine, isoleucine, tryptophan, lysine, aspartate, and phenylalanine, were enhanced, while the biosynthetic pathways of arginine, serine, glycine, and cysteine were reduced. These results indicate that, in addition to UPR activation and increased protein degradation, MSS fibroblasts have profound metabolic alterations, which may help them cope with the absence of SIL1.     

The Effect of a Silver Nanoparticle Polysaccharide System on Streptococcal and Saliva-Derived Biofilms

In this work, we studied the antimicrobial properties of a nanocomposite system based on a lactose-substituted chitosan and silver nanoparticles: Chitlac-nAg. Twofold serial dilutions of the colloidal Chitlac-nAg solution were both tested on Streptococcus mitis, Streptococcus mutans, and Streptococcus oralis planktonic phase and biofilm growth mode as well as on saliva samples. The minimum inhibitory and bactericidal concentrations of Chitlac-nAg were evaluated together with its effect on sessile cell viability, as well as both on biofilm formation and on preformed biofilm. In respect to the planktonic bacteria, Chitlac-nAg showed an inhibitory/bactericidal effect against all streptococcal strains at 0.1% (v/v), except for S. mitis ATCC 6249 that was inhibited at one step less. On preformed biofilm, Chitlac-nAg at a value of 0.2%, was able to inhibit the bacterial growth on the supernatant phase as well as on the mature biofilm. For S. mitis ATCC 6249, the biofilm inhibitory concentration of Chitlac-nAg was 0.1%. At sub-inhibitory concentrations, the Streptococcal strains adhesion capability on a polystyrene surface showed a general reduction following a concentration-dependent-way; a similar effect was obtained for the metabolic biofilm activity. From these results, Chitlac-nAg seems to be a promising antibacterial and antibiofilm agent able to hinder plaque formation.     

Characterisation studies on swelling behaviour of iron ore pellets

At JSW Steel Limited (JSWSL), pellets form the major part of the iron-bearing feed to corex and blast furnace. JSWSL produces low-basicity pellets ((CaO/SiO₂) – 0.40 to 0.50). The quality of the pellet is affected by the raw material chemistry (gangue content), flux proportion and their subsequent heat treatment to produce the fired pellets. The raw material silica, limestone addition, i.e. basicity – CaO/SiO₂ of pellet decides the mode, temperature and the amount of melt formed. The properties of the pellets are, therefore, largely governed by the form and degree of bonding achieved between ore particles and also by the stability of these bonding phases during the reduction of iron oxides. In the present study, laboratory pelletisation experiments have been carried out to know the effects of silica and basicity on the microstructure and swelling behaviour of pellets during reduction. Phase analysis was carried out using image analyser, and chemical analysis of oxide and slag phases was carried out using SEM–EDS. From the laboratory studies, it was observed that the swelling index of the pellets decreased with an increase in silica content due to the decrease in porosity. The presence of higher silica in pellet hinders the reduction step of haematite to magnetite at lower temperatures. Pellets with basicity range 0 to 0.1 exhibited lower swelling index due to the formation of high melting point fayalite phase and also at this basicity range the structure is held together by the seam-like compounds between Fe₂O₃ and SiO₂ primarily at high silica content. Higher swelling index was observed at the basicity range 0.3 to 0.7 due to the presence of low melting point calcium olivines (1115°C) between fayalite (FeSiO₄) and dicalcium silicate (Ca₂SiO₄). Low melting point slag phase enhances the swelling index of the pellets. Swelling index of the pellets considerably dropped between the basicity range 0.9 to 1.1 due to the formation of calcium ferrite phases with a close pore structure.     

Analysis of germline mutation spectra at the Huntington's disease locus supports a mitotic mutation mechanism

Trinucleotide repeat disease alleles can undergo 'dynamic' mutations in which repeat number may change when a gene is transmitted from parent to offspring. By typing >3500 sperm, we determined the size distribution of Huntington's disease (HD) germline mutations produced by 26 individuals from the Venezuelan cohort with CAG/CTG repeat numbers ranging from 37 to 62. Both the mutation frequency and mean change in allele size increased with increasing somatic repeat number. The mutation frequencies averaged 82% and, for individuals with at least 50 repeats, 98%. The extraordinarily high mutation frequency levels are most consistent with a mutation process that occurs throughout germline mitotic divisions, rather than resulting from a single meiotic event. In several cases, the mean change in repeat number differed significantly among individuals with similar somatic allele sizes. This individual variation could not be attributed to age in a simple way or to ' cis ' sequences, suggesting the influence of genetic background or other factors. A familial effect is suggested in one family where both the father and son gave highly unusual spectra compared with other individuals matched for age and repeat number. A statistical model based on incomplete processing of Okazaki fragments during DNA replication was found to provide an excellent fit to the data but variation in parameter values among individuals suggests that the molecular mechanism might be more complex.     

Beneficial effects of Helicobacter pylori eradication on idiopathic chronic urticaria

Helicobacter pylori, the most important cause of gastritis and peptic ulcer, recently has been associated with several extradigestive diseases. The aim of this study was to assess the prevalence of Helicobacter pylori infection and the effects of bacterium eradication in 42 consecutive patients affected by idiopathic chronic urticaria. Helicobacter pylori was assessed by [13C]urea breath test. Amoxicillin, clarithromycin, and lansoprazole were given to infected patients for seven days. Urticaria and gastrointestinal symptoms were assessed on enrollment and after eradication. Fifty-five percent of patients proved to be infected by Helicobacter pylori. Prevalence of gastrointestinal symptoms did not differ between infected and uninfected patients. Eighty-eight percent of infected patients in whom the bacterium was eradicated after therapy showed a total or partial remission of urticaria symptoms. Conversely, symptoms remained unchanged in all uninfected patients. In conclusion, Helicobacter pylori affects a high percentage of patients with idiopathic chronic urticaria; however, typical gastrointestinal symptoms do not identify infection status. Bacterium eradication is associated with a remission of urticaria symptoms, suggesting a possible role of Helicobacter pylori in the pathogenesis of this skin disorder.     

Comparitive investigation of performance and emission features of methanol,ethanol, DEE,and nanopartilces as fuel additives in diesel-biodiesel blends

The usage of biodiesel blends is restricted due to its low fuel consumption and high thermal NOx. The current study exhibits the usage of four different fuel additives methanol, ethanol, diethyl ether, and NiO nanoparticles in Neem biodiesel blend (NB25) to shore up the usage of neem oil methyl ester. Performance and emission experimentation of a compression-ignition engine fueled with NB25 having fuel additives were conducted at varying injection opening pressures (180, 210, and 240 bar) and static injection timings (19°, 23°, and 27° bTDC). The results indicate that when NiO fuel additives were doped in the NB25 blend, high peaks of NOx were found with betterment in performance features with a lower CO and HC emission.