Hydrogenases, accessory genes and the regulation of [NiFe] hydrogenase biosynthesis in Thiocapsa roseopersicina

The purple (Sulphur) phototrophic bacterium, Thiocapsa roseopersicina BBS contains several [NiFe] hydrogenases, of which two are membrane bound. Mutant T. roseopersicina cells, carrying deletions in both gene clusters showed hydrogenase activity. This activity was located in the cytoplasm. The structural gene cluster hoxEFUYH was identified and sequenced. In addition, genes homologous to hupUV/hoxBC, the hydrogen sensing hydrogenase have been identified and sequenced.Regulation of hydrogenase biosynthesis was studied in detail for HydSL (renamed HynSL). A random mutagenesis system was optimised for T. roseopersicina. One of the mutations was in a gene similar to that coding for the HypF proteins in other organisms. Inactivation of the hypF gene resulted in a 60-fold increase in hydrogen evolution under nitrogen fixing conditions. In addition to hypF, the following accessory genes were identified: hydD, hupK, hypC1, hypC2, hypDE. Characterisation of the corresponding gene products and search for additional accessory genes are in progress.     

Colour and COD removal from textile effluent by coagulation and advanced oxidation processes

The aim of this study was to compare the performance of coagulation, Fenton's oxidation (Fe²⁺/H₂O₂) and ozonation for the removal of chemical oxygen demand (COD) and colour from biologically pretreated textile wastewater. FeSO₄ and FeCl₃ were used as coagulants at varying doses and varying colour removal efficiency was measured. For the Fenton process, COD and colour removal efficiencies were found to be 78% and 95% for the Fenton process, and to be 64% and 71% for the Fenton-like process (Fe³⁺/H₂O₂), respectively. Ozonation experiments were conducted at different initial pH values and fixed ozone doses. Ozonation resulted in 43% COD and 97% colour removal whereas these rates increased to 54% and 99% when 5 mg/l hydrogen peroxide was added to the wastewater before ozonation at the same dose. The operating costs of all proposed treatment systems were also evaluated in this study.     

Evolutionary design of neural network architectures: a review of three decades of research

We present a comprehensive review of the evolutionary design of neural network architectures. This work is motivated by the fact that the success of an Artificial Neural Network (ANN) highly depends on its architecture and among many approaches Evolutionary Computation, which is a set of global-search methods inspired by biological evolution has been proved to be an efficient approach for optimizing neural network structures. Initial attempts for automating architecture design by applying evolutionary approaches start in the late 1980s and have attracted significant interest until today. In this context, we examined the historical progress and analyzed all relevant scientific papers with a special emphasis on how evolutionary computation techniques were adopted and various encoding strategies proposed. We summarized key aspects of methodology, discussed common challenges, and investigated the works in chronological order by dividing the entire timeframe into three periods. The first period covers early works focusing on the optimization of simple ANN architectures with a variety of solutions proposed on chromosome representation. In the second period, the rise of more powerful methods and hybrid approaches were surveyed. In parallel with the recent advances, the last period covers the Deep Learning Era, in which research direction is shifted towards configuring advanced models of deep neural networks. Finally, we propose open problems for future research in the field of neural architecture search and provide insights for fully automated machine learning. Our aim is to provide a complete reference of works in this subject and guide researchers towards promising directions.

     

Online tax payment systems as an emergent aspect of governmental transformation

The achievement of governmental transformation through the use of electronically delivered services is a worthy goal that requires significant planning and research to achieve. In order to reach transformational paradigm shifts in governmental operation, it will first be necessary to understand and optimize present governmental e-Service provisions. Of these, the revenue function of taxation is paramount. This paper describes factors related to the use and acceptance by accounting professionals of information technology intended to facilitate electronic tax filing systems. Though tested in the context of governmental tax management systems in Turkey, our findings on the use and acceptance of e-Tax systems are relevant and applicable to a great number of nations and contexts as the ongoing electronic transformation of the governmental revenue system contributes to efforts to transform governments through alternative services delivery venues and channels. We discover that intention to use automated systems as part of the governmental treasury function transformation is hindered by factors that mediate actual plans to do so, mostly in terms of normative pressures and perceptions of behavioral control, which training and education may well ameliorate. Hence, transformation of the treasury function in Turkey is only partially complete and will require additional support, direction and training on the part of the government in its interactions with the tax professionals who interact with the emergent automated system.     

The Role of the Choroid in Stargardt Disease

Stargardt disease is the commonest juvenile macular dystrophy. It is caused by genetic mutations in the ABCA4 gene. Diagnosis is not always straightforward, and various phenocopies exist. Late-onset disease can be misdiagnosed with age-related macular disease. A correct diagnosis is particularly critical because of emergent gene therapies. Stargardt disease is known to affect retinal pigment epithelium and photoreceptors. Many studies have also highlighted the importance of the choroid in the diagnosis, pathophysiology, and progression of the disease. The choroid is in an integral relationship with the retinal pigment epithelium and photoreceptors, and its possible involvement during the disease should be considered. The purpose of this review is to analyze the current diagnostic tools for choroidal evaluation and the extrapolation of useful data for ophthalmologists and researchers studying the disease.     

Gastroprotective effects of herbal medicines (roots)

Herbal medicines are now commonly used all over the world and this has increased global demand. Quality, safety, and efficacy of these drugs have become a serious concern. This review presents the medicinal plants cited in folklore that are used to treat gastrointestinal ulcers. Electronic databases, that is, Web of Science, PubMed, Scopus, and Google Scholar were searched to identify the gastroprotective effects of each plant. Ethnopharmacological studies have reported various botanical products with antiulcer activities, but there has been limited scientific research, presenting clinical data to validate the efficacy and safety of medicinal herbs as gastroprotective agents. Most studies centered on pharmacological properties of medicinal herbs as used animals models. This information has prompted us to compile a list of the medicinal herbs cited in folklore with gastroprotective activity.     

Biodiesel Feedstock from Emulsions Produced by Aqueous Processing of Yellow Mustard

The multi-stage treatment of stable oil-in-water emulsions produced during non-enzymatic aqueous processing of dehulled yellow mustard flour with cyclic ethers [tetrahydrofuran (THF) and 1,4-dioxane] was investigated to produce a single-phase oil-solvent-water miscella suitable for biodiesel production. While the single-stage treatment of yellow mustard emulsion recovered 97 % and 95 % of the oil by using 4:1 THF:oil and 9:1 dioxane:oil weight ratios, respectively, miscella phases containing more than 7 % water formed, which made them unsuitable as biodiesel feedstock. Multi-stage treatments of the emulsion using lower THF:oil and dioxane:oil weight ratios were further developed to produce oil-solvent-water miscella phases with low water content. While three-stage extraction of emulsions using 0.5:1, 1:1, 1.5:1, and 2:1 dioxane:oil weight ratios did not destabilize the emulsion, three-stage extraction using 0.5:1 and 0.75:1 THF:oil weight ratios effectively recovered over 97 % of the oil, resulting in the production of oil-rich miscella phases containing only 1 % and 1.5 % water, respectively. These miscella phases were analyzed for free fatty acid and phosphorus contents and proved to be excellent feedstocks for the preparation of high-purity methyl esters through single-phase base-catalyzed transmethylation.     

A sight on the current nanoparticle-based gene delivery vectors

Nowadays, gene delivery for therapeutic objects is considered one of the most promising strategies to cure both the genetic and acquired diseases of human. The design of efficient gene delivery vectors possessing the high transfection efficiencies and low cytotoxicity is considered the major challenge for delivering a target gene to specific tissues or cells. On this base, the investigations on non-viral gene vectors with the ability to overcome physiological barriers are increasing. Among the non-viral vectors, nanoparticles showed remarkable properties regarding gene delivery such as the ability to target the specific tissue or cells, protect target gene against nuclease degradation, improve DNA stability, and increase the transformation efficiency or safety. This review attempts to represent a current nanoparticle based on its lipid, polymer, hybrid, and inorganic properties. Among them, hybrids, as efficient vectors, are utilized in gene delivery in terms of materials (synthetic or natural), design, and in vitro/in vivo transformation efficiency.     

Gold‐supported activated NiZn coatings: hydrogen evolution and corrosion studies

Gold‐supported Raney‐type NiZn coatings were prepared on a thin Ni film‐modified copper substrate (Cu/Ni/NiZn‐Au). The hydrogen evolution activity, time stability and corrosion behaviour of the electrode was investigated in 1 M KOH solution by electrochemical, microscopic and spectroscopic technique. It was found that Au‐modified activated coatings exhibits good hydrogen evolution activity, electrochemical and physical stability as well as corrosion resistance. The enhanced hydrogen evolution activity of the Au‐modified electrode was related to the larger available surface area and/or a possible synergistic effect between the metals. Copyright © 2017 John Wiley & Sons, Ltd.     

Efficient manganese decorated cobalt based catalysts for hydrogenation of 5-hydroxymethylfurfural (HMF) to 2,5-dimethylfuran (DMF) biofuel

2,5-dimethylfuran (DMF) is a promising compound in the production of biofuel with high-quality properties. In this study, it is aimed to develop new efficient catalysts to synthesize DMF from 5-hydroxymethylfurfural (HMF). Co, Mn/Co, and Ru/Co catalysts were prepared using the NaBH₄ reduction method. The catalysts were subjected to activity tests for the hydrogenation of HMF to DMF by changing the reaction parameters, such as temperature and time. Mn/Co catalysts prepared from metal precursors at various molar ratios of Mn/Co were found to be effective in hydrogenation reactions of HMF to DMF. A 91.8% DMF yield was achieved in the presence of a Mn/Co (50/50) catalyst without noble metal at 180°C for 4 hours. The Brunauer-Emmet-Teller (BET) method, x-ray diffraction (XRD), x-ray photoelectron spectroscopy (XPS), and induction coupled plasma mass spectroscopy (ICP-MS) techniques were used to characterize the efficient Mn/Co catalyst.