Tetranorsesquiterpenoids as Attractants of Yucca Moths to Yucca Flowers

Journal of Chemical Ecology - The obligate pollination mutualism between Yucca and yucca moths is a classical example of coevolution. Oviposition and active pollination by female yucca moths occur...     

Evaluation of IP over WDM Network Architectures

The commonly used IP-backbone network architecture of today is IP/ATM/SDH/WDM. This architecture has many redundant functionalities and is not optimized to transport IP traffic. New approaches for simplified network architectures try to eliminate redundant functionalities and to decrease the protocol overhead and thereby transport IP as efficiently as possible over WDM-based optical networks. EURESCOM project P918 Integration of IP-over-optical networks: networking and management investigated scenarios for optimized IP transport in WDM-based backbone networks. In this paper, three architectures, namely Gigabit Ethernet, Packet over Sonet/SDH and Dynamic Packet Transport are investigated and evaluated as an alternative to the IP/ATM/SDH/WDM architecture.     

Exploring the bibliometric and semantic nature of negative results

Negative results are not popular to disseminate. However, their publication would help to save resources and foster scientific communication. This study analysed the bibliometric and semantic nature of negative results publications. The Journal of Negative Results in Biomedicine (JNRBM) was used as a role model. Its complete articles from 2002–2009 were extracted from SCOPUS and supplemented by related records. Complementary negative results records were retrieved from Web of Science in “Biochemistry” and “Telecommunications”. Applied bibliometrics comprised of co-author and co-affiliation analysis and a citation impact profile. Bibliometrics showed that authorship is widely spread. A specific community for the publication of negative results in devoted literature is non-existent. Neither co-author nor co-affiliation analysis indicated strong interconnectivities. JNRBM articles are cited by a broad spectrum of journals rather than by specific titles. Devoted negative results journals like JNRBM have a rather low impact measured by the number of received citations. On the other hand, only one-third of the publications remain uncited, corroborating their importance for the scientific community. The semantic analysis relies on negative expressions manually identified in JNRBM article titles and abstracts and extracted to syntactic patterns. By using a Natural Language Processing tool these patterns are then employed to detect their occurrences in the multidisciplinary bibliographical database PASCAL. The translation of manually identified negation patterns to syntactic patterns and their application to multidisciplinary bibliographic databases (PASCAL, Web of Science) proved to be a successful method to retrieve even hidden negative results. There is proof that negative results are not only restricted to the biomedical domain. Interestingly a high percentage of the so far identified negative results papers were funded and therefore needed to be published. Thus policies that explicitly encourage or even mandate the publication of negative results could probably bring about a shift in the current scientific communication behaviour.     

One Question,Multiple Answers: Biochemical and Biophysical Screening Methods Retrieve Deviating Fragment Hit Lists

Fragment‐based lead discovery is gaining momentum in drug development. Typically, a hierarchical cascade of several screening techniques is consulted to identify fragment hits which are then analyzed by crystallography. Because crystal structures with bound fragments are essential for the subsequent hit‐to‐lead‐to‐drug optimization, the screening process should distinguish reliably between binders and non‐binders. We therefore investigated whether different screening methods would reveal similar collections of putative binders. First we used a biochemical assay to identify fragments that bind to endothiapepsin, a surrogate for disease‐relevant aspartic proteases. In a comprehensive screening approach, we then evaluated our 361‐entry library by using a reporter‐displacement assay, saturation‐transfer difference NMR, native mass spectrometry, thermophoresis, and a thermal shift assay. While the combined results of these screening methods retrieve 10 of the 11 crystal structures originally predicted by the biochemical assay, the mutual overlap of individual hit lists is surprisingly low, highlighting that each technique operates on different biophysical principles and conditions.     

Spc98p and Spc97p of the yeast gamma-tubulin complex mediate binding to the spindle pole body via their interaction with Spc110p

Previously, we have shown that the yeast gamma-tubulin, Tub4p, forms a 6S complex with the spindle pole body components Spc98p and Spc97p. In this paper we report the purification of the Tub4p complex. It contained one molecule of Spc98p and Spc97p, and two or more molecules of Tub4p, but no other protein. We addressed how the Tub4p complex binds to the yeast microtubule organizing center, the spindle pole body (SPB). Genetic and biochemical data indicate that Spc98p and Spc97p of the Tub4p complex bind to the N-terminal domain of the SPB component Spc110p. Finally, we isolated a complex containing Spc110p, Spc42p, calmodulin and a 35 kDa protein, suggesting that these four proteins interact in the SPB. We discuss in a model, how the N-terminus of Spc110p anchors the Tub4p complex to the SPB and how Spc110p itself is embedded in the SPB.     

预成型纺织材料用于纤维增强复合材料

研究了利用双针床多轴向经编技术编织生产可反复拉挤的玻璃纤维或碳纤维增强聚合物复合材料（GFC或CFC）的发展和制造状况,并基于优化的挤压成型工艺过程（MVI,挤压和牵拉技术）,对这些预成型材料进行测试,对其用于复合材料的经济适用性进行了评估。     

Interferometric spatial coherence tomography: focusing fringe contrast to planes of interest using a quasi-monochromatic structured light source

Interferograms of plane parallel optical flats are hard to interpret when acquired with coherent illumination because of the complex fringe pattern resulting from the superposition of three main contributions, namely from the reference surface and the front and back sample surfaces. We illuminate the sample by a field of high temporal and specially tailored partial spatial coherence. This limits the fringe contrast to sheets of adjustable position and thickness along the axis of the interferometer. We outline the technique and demonstrate its application together with phase shifting interferometry to extract the topography of front and back surfaces of transparent samples.     

Development of benzophenone-based farnesyltransferase inhibitors as novel antimalarials

The development of farnesyltransferase inhibitors directed against Plasmodium falciparum is a strategy towards new drugs against malaria. Previously, we described benzophenone-based farnesyltransferase inhibitors with high in vitro antimalarial activity but no in vivo activity. Through the introduction of a methylpiperazinyl moiety, farnesyltransferase inhibitors with in vivo antimalarial activity were obtained. Subsequently, a structure-based design approach was chosen to further improve the antimalarial activity of this type of inhibitor. As no crystal structure of the farnesyltransferase of the target organism is available, homology modeling was used to reveal differences between the active sites of the rat/human and the P. falciparum farnesyltransferase. Based on flexible docking data, the piperazinyl moiety was replaced by a N,N,N'-trimethylethylenediamine moiety. This resulted in an inhibitor with significantly improved in vitro and in vivo antimalarial activity. Furthermore, this inhibitor displayed a notable increase in selectivity towards malaria parasites relative to human cells.