Effect of antioxidant oxidation potential in the oxygen radical absorption capacity (ORAC) assay

The “oxygen radical absorption capacity” (ORAC) assay (Ou, B., Hampsch-Woodill, M., Prior, R.L. (2001). Development and validation of an improved oxygen radical absorbance capacity assay using fluorescein as the fluorescent probe. Journal of Agricultural and Food Chemistry 49, 4619–4626) is widely employed to determine antioxidant content of foods and uses fluorescein as a probe for oxidation by peroxyl radicals. Kinetic modeling of the ORAC assay suggests that the lag phase for loss of fluorescence results from equilibrium between antioxidant and fluorescein radicals and the value of the equilibrium constant determines the shape of the lag phase. For an efficient antioxidant this constitutes a “repair” reaction for fluoresceinyl radicals and produces a well defined lag phase. The lag phase becomes less marked with increasing oxidation potential of the antioxidant. Pulse radiolysis confirms that fluoresceinyl radicals are rapidly (k ∼ 10⁹ dm³ mol⁻¹ s⁻¹) reduced by Trolox C, a water soluble vitamin E analogue. ORAC assays of phenols with varying oxidation potentials suggest that it might be employed to obtain an estimate of the redox potential of antioxidants within food materials.     

Characterizing dissolved and particulate phosphorus in water with 31P nuclear magnetic resonance spectroscopy

Management of aquatic ecosystems is hampered because current methodology limits characterization of phosphorus (P)forms. We developed a procedure to characterize dissolved (DP) and particulate (PP) P from river waters by solution 31P nuclear magnetic resonance (NMR) spectroscopy, using 4-L samples, and tested this procedure with a spiking trial. Most P was orthophosphate. Organic P forms included phosphonates, myo-inositol hexakisphosphate, and orthophosphate diesters. This research represents an important technical advance to characterize DP and PP in natural waters. It is simple, uses samples small enough for routine collection, and puts PP and DP into the same chemical environment for direct comparison. The technique is sensitive, detecting changes in spectra from P additions as small as 2% of total P, and identifying differences from two points along the flow path of a single river. However, lyophilizing samples in NaOH-ethylenediamine-tetraacetic acid (EDTA) may alter some P forms, which requires further investigation.     

Secondary structure for the apolipoprotein B mRNA editing site. Au-binding proteins interact with a stem loop

The C to U editing of apolipoprotein B (apoB) mRNA converts a glutamine codon in apoB100 mRNA into a stop translation codon thereby generating apoB48. The catalytic subunit of the editing enzyme, APOBEC-1, is an RNA-binding cytidine deaminase that requires auxiliary factors for the editing of apoB mRNA. Computer modeling and ribonuclease probing of the wild-type and mutant apoB RNA substrates reveal a stem loop at the editing site. This structure incorporates the essential sequence motifs required for editing. The localization of the edited cytidine within the loop suggests how it could be presented to the active site of APOBEC-1 for deamination. We have identified 43/45 kDa proteins from chick enterocytes and show evidence for their involvement in auxiliary editing activity. p43/45 demonstrates preferential binding to AU-rich RNA and to the Caauuug motif that forms the loop and proximal stem of the apoB mRNA.     

Gastro-oesophageal reflux: the disease of the millennium

Gastro-oesophageal reflux disease (GORD) is attributable primarily to acid and bile reflux through the lower oesophageal sphincter. Bile reflux has been implicated in severe oesophagitis, Barrett's oesophagus and oesophageal adenocarcinoma. Developments in evaluating and managing GORD and Barrett's are discussed, with their aetiological role in junctional gastro-oesophageal malignancies.     

Photochemistry and photopolymerization activity of perester derivatives of benzophenone

The spectroscopic properties and photopolymerization activities of a mono- and tetraperester derivative of benzophenone are examined and compared with those of benzophenone. Their photopolymerization activity in methyl methacrylate (MMA) and an ethoxylated bis-phenol-A diacrylate have been studied using a combination of gel permeation chromatography (GPC), and real time Fourier transform infrared spectroscopy (RTFTIR) as well as the commercial pendulum hardness test. Using GPC analysis on the poly(methyl methacrylate) samples the tetra--t-butyl perester derivative of benzophenone is found to give a higher weight average (M_w) and number average (M_n) molecular weight polymer than that produced using the mono perester. For the two peresters of benzophenone photopolymerization efficiency using real time FTIR increases with increasing initiator concentration, and no self-termination is observed up to 0.75% w/w concentration with the mono perester derivative being the more efficient initiator. Similar results were obtained using the commercial pendulum hardness tester with a triacrylate/epoxyurethane acrylate resin with benzophenone exhibiting the lowest activity. Photopolymerization activities of the initiators correlate well with their spectroscopic properties. The phosphorescence quantum yield is higher for the monoperester than the tetraperester derivative and is consistent with a shorter lifetime and lower photolysis quantum yields in 2-propanol. Compared with benzophenone, phosphorescence analysis indicates that the perester groups impart a degree of charge-transfer content to the molecule which is consistent with the degree of substitution. Ketyl radical formation on microsecond flash photolysis follows the order benzophenone > mono- > tetraperester derivative and is consistent with the phosphorescence quantum yields. On nanosecond laser flash photolysis in nitrogen-saturated acetonitrile, triplettriplet absorption is extremely weak for both the perester derivatives, being stronger for the monoperester.     

Molecular analysis of Salmonella enteritidis by pulsed-field gel electrophoresis and ribotyping

A total of 61 isolates of Salmonella enteritidis were analyzed by the techniques of pulsed-field gel electrophoresis (PFGE) and ribotyping. Twenty-three of the isolates were from Zurich, Switzerland, and 38 isolates were from the University Hospital, Kuala Lumpur, Malaysia. Five of the Malaysian isolates were hospital-related outbreak strains and were shown to be indistinguishable by PFGE analysis following digestion with three different restriction endonucleases, XbaI (5'-TCTAGA-3'), SpeI (5'-ACTAGT-3'), and AvrII (5'-CCTAGG-3'). The PFGE pattern of an isolate from a suspected carrier staff nurse was found to be identical to those of the hospital outbreak isolates. These isolates were also indistinguishable by ribotyping with SmaI and SphI. The same single PFGE pattern was also detected in 29 of 32 sporadic isolates of S. enteritidis. Four closely related ribotypes were detected among these 29 isolates. Similarly, outbreak-related strains from Switzerland showed close genetic identity by PFGE and ribotyping. Strains obtained from poultry showed more variations in their PFGE patterns and ribotypes, although the patterns were still closely related. In addition, SphI ribotypes A and D among the Swiss strains correlated with phage types 4 and 8, respectively. No correlation of phage types with PFGE pattern was noted. Both PFGE and ribotyping indicate that the S. enteritidis strains circulating in Malaysia and Switzerland are very similar and may be clonally related. Comparison of the PFGE patterns with the ribotypes for 23 Swiss and 16 Malaysian isolates showed that there was a 69% concordance in the grouping of isolates. We conclude that the close genetic similarity observed between epidemiologically unrelated and outbreak-related isolates of S. enteritidis suggests that both PFGE and ribotyping are of limited value in the epidemiological analysis of these particular isolates, possibly because of the highly clonal nature of pathogenic strains of S. enteritidis.     

A Link Adaptive Transport Protocol for Multimedia Streaming Applications in Multi Hop Wireless Networks

Transport layer performance in multi hop wireless networks has been greatly challenged by the intrinsic characteristics of these networks. In particular, the nature of congestion, which is mainly due to medium contention in multi hop wireless networks, challenges the performance of traditional transport protocols in such networks. In this paper, we first study the impact of medium contention on transport layer performance and then propose a new transport protocol for improving quality of service performance in multi hop wireless networks. Our proposed protocol, Link Adaptive Transport Protocol provides a systemic way of controlling transport layer offered load for multimedia streaming applications, based on the degree of medium contention information received from the network. Simulation results show that the proposed protocol provides an efficient scheme to improve quality of service performance metrics, such as end-to-end delay, jitter, packet loss rate, throughput smoothness and fairness for media streaming applications. In addition, our scheme requires few overhead and does not maintain any per-flow state table at intermediate nodes. This makes it less complex and more cost effective.     

Large Scale Preparation of Crystalline Glucose from Raw Starch in Corn Flour

Starch in considerable amount is lost during its purification from raw materials. Further, purification costs energy and time. To avoid these, starch in corn flour was hydrolyzed by the synergistic action of α-amylase and glucoamylase while avoiding high temperature gelatinization and liquefaction processes. When 1600 g (16%, W/W suspension) and 4000 g (40%, WW suspension) corn flour was hydrolyzed and purified, 76.0% and 50.2% glucose yields were obtained. The residues obtained were rich in protein and minerals.