Intestinal obstruction and peritoneal carcinomatosis after endoscopic resection of transitional carcinoma of urinary bladder

Gut involvement in bladder tumours is low, even exceptional in the presence of surface, low-grade neoplasia. The authors explain their experience in the diagnosis and management of a patient treated endoscopically for a vesical surface tumour which subsequently exhibited peritoneal and gut metastatic seeding. The various mechanisms for gut dissemination of vesical neoplasias and the repercussion of their endoscopic management are discussed.     

Relationship between the enzymatic determination of starch and the starch iodine index in two varieties of cider apple

Monitoring the hydrolysis or disappearance of starch by the starch iodine test is a simple procedure for determining the maturity of cider apples, but it does not indicate the exact amount of starch present. So far, studies of starch in apples have dealt exclusively with dessert apples. In this paper the relationship between the visual starch index, the dark‐coloured surface area and the real starch content was studied in two varieties of cider apple commonly used in Normandy (France). Starch determination in cider apples required adapting the protocol provided by the Boehringer enzymatic kit. The work led to proposing a simplified index with five scales instead of 10. This index gives the correspondences between the new and old scales as well as the probable starch contents for each new scale. © 2002 Society of Chemical Industry     

Evaluation of messaging middleware for high-performance cloud computing

Cloud computing is posing several challenges, such as security, fault tolerance, access interface singularity, and network constraints, both in terms of latency and bandwidth. In this scenario, the performance of communications depends both on the network fabric and its efficient support in virtualized environments, which ultimately determines the overall system performance. To solve the current network constraints in cloud services, their providers are deploying high-speed networks, such as 10 Gigabit Ethernet. This paper presents an evaluation of high-performance computing message-passing middleware on a cloud computing infrastructure, Amazon EC2 cluster compute instances, equipped with 10 Gigabit Ethernet. The analysis of the experimental results, confronted with a similar testbed, has shown the significant impact that virtualized environments still have on communication performance, which demands more efficient communication middleware support to get over the current cloud network limitations.     

METIS-II: low resource machine translation

METIS-II was an EU-FET MT project running from October 2004 to September 2007, which aimed at translating free text input without resorting to parallel corpora. The idea was to use “basic” linguistic tools and representations and to link them with patterns and statistics from the monolingual target-language corpus. The METIS-II project has four partners, translating from their “home” languages Greek, Dutch, German, and Spanish into English. The paper outlines the basic ideas of the project, their implementation, the resources used, and the results obtained. It also gives examples of how METIS-II has continued beyond its lifetime and the original scope of the project. On the basis of the results and experiences obtained, we believe that the approach is promising and offers the potential for development in various directions.     

Rough set based approaches to feature selection for Case-Based Reasoning classifiers

This paper investigates feature selection based on rough sets for dimensionality reduction in Case-Based Reasoning classifiers. In order to be useful, Case-Based Reasoning systems should be able to manage imprecise, uncertain and redundant data to retrieve the most relevant information in a potentially overwhelming quantity of data. Rough Set Theory has been shown to be an effective tool for data mining and for uncertainty management. This paper has two central contributions: (1) it develops three strategies for feature selection, and (2) it proposes several measures for estimating attribute relevance based on Rough Set Theory. Although we concentrate on Case-Based Reasoning classifiers, the proposals are general enough to be applicable to a wide range of learning algorithms. We applied these proposals on twenty data sets from the UCI repository and examined the impact of feature selection over classification performance. Our evaluation shows that all three proposals benefit the basic Case-Based Reasoning system. They also present robustness in comparison to well-known feature selection strategies.     

F-MPJ: scalable Java message-passing communications on parallel systems

This paper presents F-MPJ (Fast MPJ), a scalable and efficient Message-Passing in Java (MPJ) communication middleware for parallel computing. The increasing interest in Java as the programming language of the multi-core era demands scalable performance on hybrid architectures (with both shared and distributed memory spaces). However, current Java communication middleware lacks efficient communication support. F-MPJ boosts this situation by: (1) providing efficient non-blocking communication, which allows communication overlapping and thus scalable performance; (2) taking advantage of shared memory systems and high-performance networks through the use of our high-performance Java sockets implementation (named JFS, Java Fast Sockets); (3) avoiding the use of communication buffers; and (4) optimizing MPJ collective primitives. Thus, F-MPJ significantly improves the scalability of current MPJ implementations. A performance evaluation on an InfiniBand multi-core cluster has shown that F-MPJ communication primitives outperform representative MPJ libraries up to 60 times. Furthermore, the use of F-MPJ in communication-intensive MPJ codes has increased their performance up to seven times.     

Polygenic Risk of Hypertriglyceridemia Is Modified by BMI

Background: Genetic risk scores (GRSs) have partially improved the understanding of the etiology of moderate hypertriglyceridemia (HTG), which until recently was mainly assessed by secondary predisposing causes. The main objective of this study was to assess whether this variability is due to the interaction between clinical variables and GRS. Methods: We analyzed 276 patients with suspected polygenic HTG. An unweighted GRS was developed with the following variants: c.724C > G (ZPR1 gene), c.56C > G (APOA5 gene), c.1337T > C (GCKR gene), g.19986711A > G (LPL gene), c.107 + 1647T > C (BAZ1B gene) and g.125478730A > T (TRIB gene). Interactions between the GRS and clinical variables (body mass index (BMI), diabetes mellitus, diet, physical activity, alcohol consumption, age and gender) were evaluated. Results: The GRS was associated with triglyceride (TG) concentrations. There was a significant interaction between BMI and GRS, with the intensity of the relationship between the number of alleles and the TG concentration being greater in individuals with a higher BMI. Conclusions: GRS is associated with plasma TG concentrations and is markedly influenced by BMI. This finding could improve the stratification of patients with a high genetic risk for HTG who could benefit from more intensive healthcare interventions.     

Profile of TREM2-Derived circRNA and mRNA Variants in the Entorhinal Cortex of Alzheimer’s Disease Patients

Genetic variants in TREM2, a microglia-related gene, are well-known risk factors for Alzheimer’s disease (AD). Here, we report that TREM2 originates from circular RNAs (circRNAs), a novel class of non-coding RNAs characterized by a covalent and stable closed-loop structure. First, divergent primers were designed to amplify circRNAs by RT-PCR, which were further assessed by Sanger sequencing. Then, additional primer sets were used to confirm back-splicing junctions. In addition, HMC3 cells were used to assess the microglial expression of circTREM2s. Three candidate circTREM2s were identified in control and AD human entorhinal samples. One of the circRNAs, circTREM2_1, was consistently amplified by all divergent primer sets in control and AD entorhinal cortex samples as well as in HMC3 cells. In AD cases, a moderate negative correlation (r = −0.434) was found between the global average area of Aβ deposits in the entorhinal cortex and circTREM2_1 expression level. In addition, by bioinformatics tools, a total of 16 miRNAs were predicted to join with circTREM2s. Finally, TREM2 mRNA corresponding to four isoforms was profiled by RT-qPCR. TREM2 mRNA levels were found elevated in entorhinal samples of AD patients with low or intermediate ABC scores compared to controls. To sum up, a novel circRNA derived from the TREM2 gene, circTREM2_1, has been identified in the human entorhinal cortex and TREM2 mRNA expression has been detected to increase in AD compared to controls. Unraveling the molecular genetics of the TREM2 gene may help to better know the innate immune response in AD.