On the possible patterns of inputs for block sorting in the Burrows-Wheeler transformation

Block sorting in the Burrows-Wheeler transformation is to sort all of the n circular shifts of a string of length n lexicographically. We introduce a notion called the width of a sequence of n strings of length n and show that the values of widths are very different between the two types of sequences of strings; (1) a sequence of n randomly generated strings of length n, and (2) the sequence of n circular shifts of a randomly generated string of length n.     

Electrochemical routes for environmentally friendly recycling of rare-earth-based (Sm–Co) permanent magnets

Journal of Applied Electrochemistry - The consumption of critical raw materials, especially those in permanent magnets of Nd–Fe–B and Sm–Co-type, has significantly grown in the...     

Sliding mode closed-loop control of FES: controlling the shank movement

Functional electrical stimulation (FES) enables restoration of movement in individuals with spinal cord injury. FES-based devices use electric current pulses to stimulate and excite the intact peripheral nerves. They produce muscle contractions, generate joint torques, and thus, joint movements. Since the underlying neuromuscular-skeletal system is highly nonlinear and time-varying, feedback control is necessary for accurate control of the generated movement. However, classical feedback/closed-loop control algorithms have so far failed to provide satisfactory performance and were not able to guarantee stability of the closed-loop system. Because of this, only open-loop controlled FES devices are in clinical use in spite of their limitations. The purpose of the reported research was to design a novel closed-loop FES controller that achieves good tracking performance and guarantees closed-loop stability. Such a controller was designed based on a mathematical neuromuscular-skeletal model and is founded on a sliding mode control theory. The controller was used to control shank movement and was tested in computer simulations as well as in actual experiments on healthy and spinal cord injured subjects. It demonstrated good robustness, stability, and tracking performance properties.     

Diterpene structure elucidation from 13cnmr spectra with inductive logic programming

We present a novel application ofInductive Logic Programming (ILP) to the problem of diterpene structure elucidation from 13 CNMR spectra. Diterpenes are organic compounds oflow molecular weight with a skeleton of 20 carbon atoms. They are of significant chemical and commercial interest because oftheir use as lead compounds in the search for new pharmaceutical effectors. The interpretation of diterpene 13 CNMR spectra normally requires specialists with detailed spectroscopic knowledge and substantial experience in natural products chemistry, specifically knowledge on peak patterns and chemical structures. Given a database ofpeak patterns for diterpenes with known structure, we apply several ILP approaches to discover correlations between peak patterns and chemical structure. The approaches used include first - order inductive learning, relational instance based learning, induction oflogical decision trees, and inductive constraint logic. Performance close to that of domain experts is achieved, which suffices for practical use.     

如何设计安全、有效的信号继电器

高档的通信设备曾一度只能在办公环境中才能使用,然而现在这种情况已经改变,家庭中已经普遍具备了互连能力,许多家用电子设备现在通过Ipv6和其他技术已经具备了上网能力。随着宽带通信应用的增加,调制解调器、各种DSL接入复用器以及其他类似设备的安装已经遍及办公室和家庭,消费者可以方便获得价廉的通信设备。对于设备制造商来说,这些装置必须满足安全标准,如IEC60950(InternationalElectrotechnicalCommission第三版),它要求在与数据通信线连接的设备上实现电话网络高压电路的隔离。一般情况下,人们采用传统的电磁通信继电器来开关内…     

Differential inhibition of epidermal growth factor signaling pathways in rat hepatocytes by long-term ethanol treatment

BACKGROUND & AIMS: Long-term ethanol intake suppresses liver regeneration in vivo and ethanol interferes with epidermal growth factor (EGF)-induced DNA synthesis in vitro. Therefore, the effects of long-term ethanol treatment on EGF-activated signaling reactions in rat hepatocytes were investigated. METHODS: Hepatocytes from long-term ethanol-fed rats and pair-fed controls were stimulated with EGF (0.5-20 nmol/L) for 15-120 seconds. Tyrosine phosphorylation of EGF receptor (EGFR), Shc, and phospholipase-C gamma1 (PLC gamma), and growth factor receptor binding protein 2 (Grb2) coprecipitation with EGFR and Shc were analyzed by Western blotting. RESULTS: EGFR autophosphorylation was suppressed at all EGF concentrations in ethanol-fed cells compared with pair-fed cells, without significant differences in total EGFR protein or EGFR tyrosine kinase activity detected in cell lysates, suggesting that intracellular factors suppressed EGFR function. EGF-induced PLC gamma tyrosine phosphorylation and inositol 1,4,5-trisphosphate (InsP3) formation were suppressed, but cytosolic [Ca2+]c elevation was little affected, indicating enhanced InsP3-mediated intracellular Ca2+ release in ethanol-fed cells. Grb2 binding to EGFR was suppressed, but EGF-induced Shc tyrosine phosphorylation and Grb2 association with Shc were not significantly decreased. CONCLUSIONS: Long-term ethanol feeding suppressed EGF-induced receptor autophosphorylation in rat hepatocytes with differential inhibition of downstream signaling processes mediated by PLC gamma, Shc, and Grb2. Altered patterns of downstream signals emanating from EGFR may contribute to deficient liver regeneration in chronic alcoholism.     

Effects of sample orientation on nonpiloted ignition of thin poly(methyl methacrylate) sheets by a laser: 2. Experimental results

The effect of the sample orientation angle on frontside (irradiated surface) ignition and subsequent backside (nonirradiated surface) flame appearance over thin poly(methyl methacrylate) (PMMA) sheets having thicknesses of 0.2 and 0.5 mm has been experimentally investigated, using a CO₂ laser as an external radiant source in quiescent normal gravity. The sample orientation angle was varied from θ=−90° (ceiling configuration) to +90° (floor configuration) at intervals of 15° under three different laser powers of 16.0, 17.3, and 26.1 W. The shortest frontside ignition delay time was observed for the ceiling configuration (θ=−90°) and frontside ignition delay time significantly varied with increase in sample orientation angle at a laser power of 16.0 W. As the laser power was increased, frontside ignition was observed at all angles and its delay time became less dependent on the sample orientation angle. The appearance of a backside flame was achieved after the formation of an open hole (due to local consumption of the sample) by two different processes: the onset of laser induced ignition over the backside sample (backside ignition) and a flame traveling from the frontside through an open hole to the backside (backside flame). The former process was observed for a limited number of cases only around the vertical configurations (−30°?θ?30°). The delay time for the appearance of backside flame tended to be longer for sample surfaces facing downward (θ°<0) than for the sample surface facing upward (θ?0°) regardless of the laser power. When the duration of laser irradiation was shortened from 10 to 4 s, as soon as the laser was shut off, the flame on the frontside immediately shrank, moved close to the sample surface, and then traveled rapidly to the backside. Therefore, the delay time of backside flame appearance (about 6 s) became longer with longer duration of laser irradiation after the onset of a frontside flame. The size of the hole (about 4 mm diameter) was large enough for the flame to travel through it, even after 4 s of laser irradiation to sample. These results indicate that the size of the hole appears to be not a critical parameter for the appearance of the backside flame.     

IMAGE-WARP: a real-space restoration method for high-resolution STEM images using quantitative HRTEM analysis

We have developed a new method for processing distorted high-resolution scanning transmission electron microscopy (STEM) images. The method is based on finding the displaced vertices in the experimental STEM image and warping to geometrically correct reference grid of the object. As a reference grid for warping a structural model obtained using a high-resolution transmission electron microscopy (HRTEM) analysis of the area of interest is utilised. Combined with quantitative HRTEM analysis the IMAGE-WARP method provides a real-space restoration of high-resolution high-angle annular dark-field (HAADF) STEM images without affecting the original Z-contrast information. The method can be applied to extract valuable compositional atomic-column data from any HAADF-STEM image of any kind of bulk crystals with local occupancy or chemistry fluctuations, stacking faults, special grain boundaries or interfaces, for which we have an available structural model. After the warping, distortion-corrected images can be further enhanced using conventional image-filtering techniques, and finally quantified with HAADF-STEM image simulations. The applicability of the IMAGE-WARP method was illustrated using experimental HAADF-STEM images of a strontium titanate crystal disrupted with a Ruddlesden-Popper-type antiphase boundary.     

Iron reduction potentiates hydroxyl radical formation only in flavonols

Flavonoids, substantial components of the human diet, are generally considered to be beneficial. However, they may possess possible pro-oxidative effects, which could be based on their reducing potential. The aims of this study were to evaluate the ability of 26 flavonoids to reduce ferric ions at relevant pH conditions and to find a possible relationship with potentiation of hydroxyl radical production. A substantial ferric ions reduction was achieved under acidic conditions, particularly by flavonols and flavanols with the catecholic ring B. Apparently corresponding bell-shaped curves displaying the pro-oxidant effect of flavonols quercetin and kaempferol on iron-based Fenton reaction were documented. Several flavonoids were efficient antioxidants at very low concentrations but rather inefficient or pro-oxidative at higher concentrations. Flavonols, morin and rutin were progressively pro-oxidant, while 7-hydroxyflavone and hesperetin were the only flavonoids with dose-dependent inhibition of hydroxyl radical production. Conclusively, administration of flavonoids may lead to unpredictable consequences with few exceptions.