Bacterial communication systems: A mathematical formulation of negative chemotaxis

The emergence of molecular communication (MC) has provided a new paradigm for communication at nanoscale, besides the electromagnetic one. Numerous biological systems have been proposed that could be used for communication, using mostly bacteria as information carriers, ensuring biocompatibility and low complexity requirements. In this work, message dissemination dynamics in a bacterial communication system was under investigation by means of a simulation framework that was designed and developed based on a commercial tool. A mathematical formulation is proposed, in an effort to accurately predict the system's behavior under the presence of chemotactic‐like nodes. Simulation results are in strong agreement with the respective mathematical model, for a wide range of biological processes, including phenomena such as chemotaxis, bacterial growth cycle, and biological message transformation dynamics. In the case of a simple simulation scenario exhibiting chemotaxis, the mean accuracy improvement reaches values of up to 19% .     

Biosurfactant Mediated Biosynthesis of Selected Metallic Nanoparticles

Developing a reliable experimental protocol for the synthesis of nanomaterials is one of the challenging topics in current nanotechnology particularly in the context of the recent drive to promote green technologies in their synthesis. The increasing need to develop clean, nontoxic and environmentally safe production processes for nanoparticles to reduce environmental impact, minimize waste and increase energy efficiency has become essential in this field. Consequently, recent studies on the use of microorganisms in the synthesis of selected nanoparticles are gaining increased interest as they represent an exciting area of research with considerable development potential. Microorganisms are known to be capable of synthesizing inorganic molecules that are deposited either intra- or extracellularly. This review presents a brief overview of current research on the use of biosurfactants in the biosynthesis of selected metallic nanoparticles and their potential importance.     

Magnetic Force Microscopy in Liquids

In this work, the use of magnetic force microscopy (MFM) to acquire images of magnetic nanostructures in liquid environments is presented. Optimization of the MFM signal acquisition in liquid media is performed and it is applied to characterize the magnetic signal of magnetite nanoparticles. The ability for detecting magnetic nanostructures along with the well‐known capabilities of atomic force microscopy in liquids suggests potential applications in fields such as nanomedicine, nanobiotechnology, or nanocatalysis.     

TectoRNA and 'kissing-loop' RNA: atomic force microscopy of self-assembling RNA structures

RNA molecules have been much less studied by atomic force microscopy (AFM) than have DNA molecules. In this paper, AFM imaging is presented for two different RNA molecules able to self‐assemble into complex supramolecular architectures. The first one is a molecular dimer of a 230‐nt RNA fragment coming from the RNA genome of a murine leukaemia virus. The monomeric RNA fragment, which appears by AFM as an elongated structure with a mean aspect ratio of 1.4, assembles into a dimer of elongated structures through the formation of a ‘kissing‐loop’ RNA interaction. The second one is a large supramolecular fibre formed of artificial self‐assembling RNA molecular units called tectoRNA. The fibre lengths by AFM suggest that there are 50–70 tectoRNA units per fibre. Some methods and limitations are presented for measuring molecular volumes from AFM images.