Simple Sequence Repeat Markers in Genetic Divergence and Marker-Assisted Selection of Rice Cultivars: A Review

Sequencing of rice genome has facilitated the understanding of rice evolution and has been utilized extensively for mining of DNA markers to facilitate marker-assisted breeding. Simple sequence repeat (SSR) markers that are tandemly repeated nucleotide sequence motifs flanked by unique sequences are presently the maker of choice in rice improvement due to their abundance, co-dominant inheritance, high levels of allelic diversity, and simple reproducible assay. The current level of genome coverage by SSR markers in rice is sufficient to employ them for genotype identification and marker-assisted selection in breeding for mapping of genes and quantitative trait loci analysis. This review provides comprehensive information on the mapping and applications of SSR markers in investigation of rice cultivars to study their genetic divergence and marker-assisted selection of important agronomic traits.     

The distribution of anthocyanins in grape skin extracts of port wine cultivars as determined by high performance liquid chromatography

The distribution of anthocyanins in methanolic skin extracts of 16 grape cultivars used for port wine production and grown at five sites in the Douro Valley in Northern Portugal has been assessed by high performance liquid chromatography. Results are confined to the seven most readily separated and identified anthocyanins and are expressed as percentages of their total (88–99% of the total integrated area). Anthocyanins based on malvidin (Mv) predominated. Of these, Mv 3-glucoside was the major pigment (33–60%), being exceeded by Mv 3-p-coumarylglucoside (2–51%) in only two cultivars; Mv 3-acetylglucoside (1–15%) was consistently the lowest. Peonidin 3-glucoside (1–27%) was prominent in four cultivars, but delphinidin 3-glucoside (1–11%), petunidin 3-glucoside (2–11%) and cyanidin 3-glucoside (trace-6%) were of low proportions throughout. The ratio Mv 3-acetylglucoside/total Mv glucosides appeared characteristic of cultivar, independent of site, and a useful aid to identification of grape cultivars. The coloured pulp of some cultivars contained peonidin 3-glucoside as a major component, present in greater proportions than in the skin; the percentage of Mv 3-p-coumarylglucoside was lower in pulp than in skin. The identities of six of the seven anthocyanins were confirmed by fast atom bombardment mass spectrometry and the structures of the Mv derivatives were determined by nuclear magnetic resonance. The formation of formyl and acetyl anthocyanin artefacts is described.     

Methane Transport Capacity of Rice Plants. II. Variations Among Different Rice Cultivars and Relationship with Morphological Characteristics

Of the total methane (CH4) emitted from a rice field during the growing season 60–90% is emitted through the rice plants. We determined the methane transport capacity (MTC) of rice plants at different physiological growth stages using an automatic measuring system under greenhouse conditions. A total of 12 cultivars (10 inbred varieties and 2 hybrids) were studied in sets of two experiments and was distinguished into three groups according to the patterns of MTC development. MTC is generally increasing from seedling stage to panicle initiation (PI), but differs in the development from PI to maturity. While the hybrid showed a gradual increase in MTC, the inbred cultivars showed either minor changes in MTC or a drastic decrease from flowering to maturity. Among tall cultivars, Dular showed the highest MTC, followed by B40; the lowest MTC was found in Intan. High-yielding dwarf cultivars showed MTC in the descending order of IR72 > IR52 > IR64 > PSBRc 20. New plant type cultivars showed very low MTC with IR65600 exhibiting the smallest MTC at PI, flowering, and maturity. Hybrids (Magat and APHR 2) showed the largest MTC that continued to increased with plant growth. The MTC patterns were attributed to growth parameters and the development of morphological characteristics of the aerenchyma. These results suggest that in tall, dwarf, and NPT cultivars, increase in root or aboveground biomass during initial growth determines a corresponding increase in MTC. Once aerenchyma has fully developed, further increase in plant biomass would not influence MTC. However, in the case of hybrids, a positive relationship of MTC with root + shoot biomass (r = 0.672, p 0.05) and a total plant biomass including grain (r = 0.849, p 0.01) indicate continuous development of aerenchyma with plant growth, resulting in enhanced MTC. In all cultivars, tiller number, but not height, was linearly related to MTC, indicating that the number of outlets/channels rather than plant size/biomass determines the transport of CH₄. These results clearly demonstrate that rice cultivars differ significantly in MTC. Therefore, the use of high-yielding cultivars with low MTC (for example, PSBRc 20, IR65598, and IR65600) could be an economically feasible, environmentally sound, and promising approach to mitigate CH₄ emissions from rice fields.     

波兰果树生产考察报告

概述了近20年来波兰水果产量,栽培的果树品种构成,主栽品种,以及各种水果产品的供需状况和果树科研情况。     

Application of nine air-dried Capsicum annum cultivars as food preservative: Micronutrient content,antioxidant activity,and foodborne pathogens inhibitory effects

Capsicum annum cultivars Yellow cayenne, Portafortuna, Idealino, Sole, Duemila, Pellegrino, Fantasia, Loco, and Effix were investigated for their antioxidant properties and foodborne pathogens inhibitory activity. The total phenols, flavonoids, anthocyanins, capsaicinoids, carotenoids, ascorbic acid, and vitamin E content were also determined. Duemila and Portafortuna cultivars showed the highest total phenol content with values of 924.3 and 935.0 mg of chlorogenic acid equivalents/100 g dried weight, respectively. Idealino pepper presented the highest capsaicin content (2932.1 μg/g dried weight). The antioxidant capacity was evaluated by using 2,2’-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid test, 2,2-diphenyl-1-picrylhydrazyl test, and ferric reducing ability power assay. Both Pellegrino and Idealino samples exhibited a promising radical scavenging ability against 2,2’-azino-bis(3-ethylbenzothiazoline-6-sulphonic acid radical with IC₅₀ values of 45.2 and 45.7 μg/mL, respectively. All the extracts were able to inhibit the growth of Staphylococcus aureus and Listeria monocytogenes investigated strains. The most active are Effix and Fantasia peppers with minimal inhibitory concentration between 12.5 and 25.0 mg/mL, respectively. Overall, these results support the use of these pepper species as dried extract in food preservation.     

Effects of saline stress on mineral composition,phenolic acids and flavonoids in leaves of artichoke and cardoon genotypes grown in floating system

BACKGROUND: Cynara cardunculus is a species native to the Mediterranean basin. It includes globe artichoke and cultivated cardoon as well as their progenitor wild cardoon. The species is a source of biophenols, and its leaf extracts have been widely used in herbal medicine as hepatoprotectors and choleretics since ancient times. The aim of this study was to determine the effect of increasing the level of salinity in the nutrient solution (1 or 30 mmol L^?1 NaCl) on biomass production, mineral composition, radical‐scavenging activity, caffeoylquinic acids and flavonoids in three artichoke (‘Romolo’, ‘Violetto di Provenza’ and ‘Violetto di Romagna’) and three cultivated cardoon (‘Bianco Avorio’, ‘Bianco Gigante Inerme’ and ‘Gigante di Romagna’) cultivars grown in a floating system. RESULTS: Increased salinity in the nutrient solution decreased the leaf dry biomass and leaf number of artichoke and cultivated cardoon cultivars. Salinity reduced macro‐ and microelement accumulation in leaves (e.g. N, K, Ca, Mg, Fe, Mn and B) but improved their antioxidant activity, total polyphenols, chlorogenic acid, cynarin and luteolin. The cultivated cardoons, especially ‘Bianco Avorio’ and ‘Gigante di Romagna’, showed higher biomass and leaf number than those observed in artichoke genotypes. ‘Violetto di Provenza’ exhibited the highest content of chlorogenic acid, closely followed by ‘Violetto di Romagna’, whereas for cynarin content the highest values were recorded in ‘Violetto di Provenza’, ‘Bianco Avorio’ and ‘Gigante di Romagna’. The highest content of luteolin was recorded in ‘Gigante di Romagna’ and ‘Bianco Avorio’, while the highest content of apigenin was observed in ‘Gigante di Romagna’. CONCLUSION: The results showed that the floating system could be considered an effective tool to improve quality aspects through proper management of the salt concentration in the nutrient solution. They also suggest that specific cultivars should be selected to obtain the desired profile of bioactive compounds. © 2012 Society of Chemical Industry     

不同品种金针菇特征挥发性物质的差异分析

采用顶空固相微萃取-气相色谱-质谱(solid phase micro-extraction-gas chromatography-mass spectrometry,SPME-GC-MS)联用技术和电子鼻技术对金针菇5 个品种川金3号、川金11号、川金54号、L4和L7中的挥发性物质进行鉴定并定量分析,并结合主成分分...