Nucleic Acid Nanostructures for Chemical and Biological Sensing

The nanoscale features of DNA have made it a useful molecule for bottom‐up construction of nanomaterials, for example, two‐ and three‐dimensional lattices, nanomachines, and nanodevices. One of the emerging applications of such DNA‐based nanostructures is in chemical and biological sensing, where they have proven to be cost‐effective, sensitive and have shown promise as point‐of‐care diagnostic tools. DNA is an ideal molecule for sensing not only because of its specificity but also because it is robust and can function under a broad range of biologically relevant temperatures and conditions. DNA nanostructure‐based sensors provide biocompatibility and highly specific detection based on the molecular recognition properties of DNA. They can be used for the detection of single nucleotide polymorphism and to sense pH both in solution and in cells. They have also been used to detect clinically relevant tumor biomarkers. In this review, recent advances in DNA‐based biosensors for pH, nucleic acids, tumor biomarkers and cancer cell detection are introduced. Some challenges that lie ahead for such biosensors to effectively compete with established technologies are also discussed.     

Nano and micro architectures for self-propelled motors

Self-propelled micromotors are emerging as important tools that help us understand the fundamentals of motion at the microscale and the nanoscale. Development of the motors for various biomedical and environmental applications is being pursued. Multiple fabrication methods can be used to construct the geometries of different sizes of motors. Here, we present an overview of appropriate methods of fabrication according to both size and shape requirements and the concept of guiding the catalytic motors within the confines of wall. Micromotors have also been incorporated with biological systems for a new type of fabrication method for bioinspired hybrid motors using three-dimensional (3D) printing technology. The 3D printed hybrid and bioinspired motors can be propelled by using ultrasound or live cells, offering a more biocompatible approach when compared to traditional catalytic motors.     

Nanorobots Constructed from Nanoclay: Using Nature to Create Self‐Propelled Autonomous Nanomachines

Self‐propelled, autonomous micro and nanomachines are at the forefront of current nanotechnology. These micro and nanodevices move actively to perform desired tasks, usually using chemical energy from their surrounding environment. Typically, these structures are fabricated via clean room or template‐based electrodeposition methodologies, which yield relatively low numbers of these devices. To utilize these machines in industrial‐scale operations, one would need an inexpensive fabrication route for mass production of nanomachines. The use of naturally occurring nanotubes, Halloysite nanoclay, to fabricate functional nanomotors in great quantities is demonstrated. These nanotubes can be mined in ton quantities and used as base for the fabrication of nanomachines. In addition, it is well known that the surface groups of Halloysite nanoclay bind strongly with heavy metals, which makes it potentially useful in environmental remediation.     

Nano and micro architectures for self-propelled motors

Abstract

Self-propelled micromotors are emerging as important tools that help us understand the fundamentals of motion at the microscale and the nanoscale. Development of the motors for various biomedical and environmental applications is being pursued. Multiple fabrication methods can be used to construct the geometries of different sizes of motors. Here, we present an overview of appropriate methods of fabrication according to both size and shape requirements and the concept of guiding the catalytic motors within the confines of wall. Micromotors have also been incorporated with biological systems for a new type of fabrication method for bioinspired hybrid motors using three-dimensional (3D) printing technology. The 3D printed hybrid and bioinspired motors can be propelled by using ultrasound or live cells, offering a more biocompatible approach when compared to traditional catalytic motors.     

A Supra‐photoswitch Involving Sandwiched DNA Base Pairs and Azobenzenes for Light‐Driven Nanostructures and Nanodevices

A supra‐photoswitch is designed for complete ON/OFF switching of DNA hybridization by light irradiation for the purpose of using DNA as a material for building nanostructures. Azobenzenes, attached to D ‐threoninols that function as scaffolds, are introduced into each DNA strand after every two natural nucleotides (in the form (NNX)n where N and X represent the natural nucleotide and the azobenzene moiety, respectively). Hybridization of these two modified strands forms a supra‐photoswitch consisting of alternating natural base pairs and azobenzene moieties. In this newly designed sequence, each base pair is sandwiched between two azobenzene moieties and all the azobenzene moieties are separated by base pairs. When the duplex is irradiated by visible light, the azobenzene moieties take the trans form and this duplex is surprisingly stable compared to the corresponding native duplex composed of only natural oligonucleotides. On the other hand, when the azobenzene moieties are isomerized to the cis form by UV light irradiation, the duplex is completely dissociated. Based on this design, a DNA hairpin structure is synthesized that should be closed by visible light irradiation and opened by UV light irradiation at the level of a single molecule. Indeed, perfect ON/OFF photoregulation is attained. This is a promising strategy for the design of supra‐photoswitches such as photoresponsive sticky ends on DNA nanodevices and other nanostructures.     

A Universal Chemical Method for Rational Design of Protein-Based Nanoreactors**

Self-assembly of a monomeric protease to form a multi-subunit protein complex “proteasome” enables targeted protein degradation in living cells. Naturally occurring proteasomes serve as an inspiration and blueprint for the design of artificial protein-based nanoreactors. Here we disclose a general chemical strategy for the design of proteasome-like nanoreactors. Micelle-assisted protein labeling (MAPLab) technology along with the N-terminal bioconjugation strategy is utilized for the synthesis of a well-defined monodisperse self-assembling semi-synthetic protease. The designed protein is programmed to self-assemble into a proteasome-like nanostructure which preserves the functional properties of native protease.     

Nano/Microrobots Meet Electrochemistry

Artificial autonomous self‐propelled nano and microrobots are an important part of contemporary technology. They are typically self‐powered, taking chemical energy from their environment and converting it to motion. They can move in complex environments and channels, deliver cargo, perform nanosurgery, act as chemotaxis and perform sense‐and‐act actions. The electrochemistry is closely interwoven within this field. In the case of self‐electrophoretically driven nano/microrobots, electrochemical mechanism has been the basis of power, which translates chemical energy to motion. Electrochemistry is also a major tool for the fabrication of these micro and nanodevices. Electrochemistry and electric fields can be used for the directing of nanorobots and for detection of their positions. Ultimately, nano and microrobots can dramatically improve performances of electrochemical sensors and biosensors, as well as of the energy generating devices. Here, all aspects in the fundamentals and applications of electrochemistry in the realm of nano‐ and microrobots are reviewed.