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Distortion of DNA Origami on Graphene Imaged with Advanced TEM Techniques
Authors:Yoones Kabiri  Adithya N Ananth  Jaco van der Torre  Allard Katan  Jin‐Yong Hong  Sairam Malladi  Jing Kong  Henny Zandbergen  Cees Dekker
Affiliation:1. Kavli Institute of Nanoscience Delft, Delft University of Technology, Delft, The Netherlands;2. Department of Electrical Engineering and Computer Science, Massachusetts Institute of Technology, Cambridge, MA, USA
Abstract:While graphene may appear to be the ultimate support membrane for transmission electron microscopy (TEM) imaging of DNA nanostructures, very little is known if it poses an advantage over conventional carbon supports in terms of resolution and contrast. Microscopic investigations are carried out on DNA origami nanoplates that are supported onto freestanding graphene, using advanced TEM techniques, including a new dark‐field technique that is recently developed in our lab. TEM images of stained and unstained DNA origami are presented with high contrast on both graphene and amorphous carbon membranes. On graphene, the images of the origami plates show severe unwanted distortions, where the rectangular shape of the nanoplates is significantly distorted. From a number of comparative control experiments, it is demonstrated that neither staining agents, nor screening ions, nor the level of electron‐beam irradiation cause this distortion. Instead, it is suggested that origami nanoplates are distorted due to hydrophobic interaction of the DNA bases with graphene upon adsorption of the DNA origami nanoplates.
Keywords:DNA origami  graphene  nanostructures  transmission electron microscopy
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