Differential habitat use patterns of yellow perch Perca flavescens in eastern Lake Michigan and connected drowned river mouth lakes

Understanding stock structure and habitat use is important for sustainable fisheries management and conservation of genetic and phenotypic diversity. In eastern Lake Michigan, yellow perch Perca flavescens is found in both the nearshore region of Lake Michigan proper and drowned river mouth (DRM) lakes, small estuary-like systems directly connected to Lake Michigan. Recent genetic analyses suggest complex stock structure between these habitats and the potential migration of Lake Michigan yellow perch into the profundal zone of DRM lakes. We quantified carbon (δ¹³C) and oxygen (δ¹⁸O) stable isotope ratios of yellow perch otolith cores to index natal origins, and measured muscle δ¹³C, nitrogen (δ¹⁵N), δ¹⁸O, and hydrogen (δ²H) isotope ratios to reflect recent diet and habitat use. Stable isotope ratios of otolith cores and muscle samples support the existence of resident populations in nearshore Lake Michigan and DRM lakes, as well as Lake Michigan migrants using DRM lakes. Most fish caught in DRM lakes that had natal and recent stable isotope values similar to Lake Michigan fish were collected during fall in DRM lake profundal zones. Comparison of otolith core and muscle stable isotope ratios of individual yellow perch suggest that individuals that recently migrated to DRM lakes also spent early life in Lake Michigan. Differential habitat use patterns of yellow perch in eastern Lake Michigan may have important implications for harvest estimates and fishing regulations. Migration by Lake Michigan fish into DRM lakes does not appear to be related to reproduction, and the underlying benefits of these migrations remain unclear.