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Ultrastructural Imaging of Salmonella–Host Interactions Using Super‐resolution Correlative Light‐Electron Microscopy of Bioorthogonal Pathogens
Authors:Dr. Daphne M. van Elsland  Dr. Sílvia Pujals  Thomas Bakkum  Dr. Erik Bos  Nikolaos Oikonomeas‐Koppasis  Dr. Ilana Berlin  Dr. Jacques Neefjes  Dr. Annemarie H. Meijer  Dr. Abraham J. Koster  Dr. Lorenzo Albertazzi  Dr. Sander I. van Kasteren
Affiliation:1. Leiden Institute of Chemistry and, The Institute for Chemical Immunology, Leiden University, Leiden, The Netherlands;2. Department of Cell and Chemical Biology, Institute for Chemical Immunology, Leiden University Medical Center LUMC, Leiden, The Netherlands;3. Department of Nanoscopy for Nanomedicine, Institute of Bioengineering of Catalonia (IBEC), Barcelona Institute of Science and Technology, Barcelona, Spain;4. Department of Electron Microscopy, Leiden University Medical Center LUMC, Leiden, The Netherlands;5. Institute of Biology Leiden, Leiden University, Leiden, The Netherlands;6. Department of Biomedical Engineering and Institute of Complex Molecular Systems, Eindhoven University of Technology, Eindhoven, The Netherlands
Abstract:The imaging of intracellular pathogens inside host cells is complicated by the low resolution and sensitivity of fluorescence microscopy and by the lack of ultrastructural information to visualize the pathogens. Herein, we present a new method to visualize these pathogens during infection that circumvents these problems: by using a metabolic hijacking approach to bioorthogonally label the intracellular pathogen Salmonella Typhimurium and by using these bioorthogonal groups to introduce fluorophores compatible with stochastic optical reconstruction microscopy (STORM) and placing this in a correlative light electron microscopy (CLEM) workflow, the pathogen can be imaged within its host cell context Typhimurium with a resolution of 20 nm. This STORM‐CLEM approach thus presents a new approach to understand these pathogens during infection.
Keywords:bioorthogonal chemistry  electron microscopy  fluorescence  host–  pathogen interactions  infection
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