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Optimization of Thienopyrrole‐Based Finger‐Loop Inhibitors of the Hepatitis C Virus NS5B Polymerase
Authors:Jose?Ignacio Martin?Hernando Dr  Jesus?Maria Ontoria Dr  Savina Malancona  Barbara Attenni  Fabrizio Fiore  Fabio Bonelli  Uwe Koch Dr  Stefania Di?Marco Dr  Stefania Colarusso  Simona Ponzi  Nadia Gennari  Sue?Ellen Vignetti  Maria del?Rosario?Rico?Ferreira Dr  Jörg Habermann Dr  Michael Rowley Dr  Frank Narjes Dr
Affiliation:1. Department of Medicinal Chemistry, Istituto di Ricerche di Biologia Molecolare P. Angeletti S.p.A. Merck Sharp & Dohme Research Laboratories Rome, Via Pontina km 30,600, 00040 Pomezia (Italy), Fax: (+39)?06?91093?625;2. Department of Biochemistry
Abstract:Infections caused by the hepatitis C virus (HCV) are a significant world health problem for which novel therapies are in urgent demand. The NS5B polymerase of HCV is responsible for the replication of viral RNA and has been a prime target in the search for novel treatment options. We had discovered allosteric finger‐loop inhibitors based on a thieno3,2‐b]pyrrole scaffold as an alternative to the related indole inhibitors. Optimization of the thienopyrrole series led to several N‐acetamides with submicromolar potency in the cell‐based replicon assay, but they lacked oral bioavailability in rats. By linking the N4‐position to the ortho‐position of the C5‐aryl group, we were able to identify the tetracyclic thienopyrrole 40 , which displayed a favorable pharmacokinetic profile in rats and dogs and is equipotent with recently disclosed finger‐loop inhibitors based on an indole scaffold.
Keywords:antiviral agents  drug discovery  hepatitis   C  NS5B polymerase  thienopyrroles
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