首页 | 本学科首页   官方微博 | 高级检索  
     

海带栽培品系和长海带ITS区的PCR扩增及序列分析
引用本文:汪文俊,王广策,张宝玉,蒋本禹,曾呈奎. 海带栽培品系和长海带ITS区的PCR扩增及序列分析[J]. 高技术通讯, 2005, 15(4): 95-101
作者姓名:汪文俊  王广策  张宝玉  蒋本禹  曾呈奎
作者单位:中国科学院海洋研究所,青岛,266071中国科学院研究生所,北京,100039;中国科学院海洋研究所,青岛,266071
基金项目:863计划(2004AA603220),国家自然科学基金(30170499,30250003,40476059),中科院海洋研究所知识创新前沿方向性,“十五”重大科技专项(2003AA2Z3504)资助项目
摘    要:对遗传背景清晰且具有显著表型差异的海带6个栽培品系(CUL002,CUL860,CUL1170,CUE017,CUE018,CUL901)和长海带(L.longissia)的ITS区进行了PCR扩增和序列测定,并分析了8个种17个品系(其中7种共10株从GenBank中获得)海带之间的系统进化关系。结果表明:表型各异的6个海带栽培品系ITS区差别很小,其中ITS1 5.8S rDNA序列完全相同,部分品系间ITS2序列有个别碱基差异;进化树显示与日本海带(L.japonica,AF319018)聚在一起,相似性大于98%,其中CUL901、CUL860和CULll70的ITS序列完全相同。长海带(L.longissia)的ITS 5.8S rDNA和日本海带(L.japonica,AF319018)的完全相同。以Undaria peterseniana为外类群,根据ITS 5.8S rDNA序列构建进化树,6栽培品系及长海带与日本海带聚在一起;17株海带基本构成两个大的进化枝。研究结果揭示了我国海域栽培的长海带可能与日本海带(L.iaponica,AF319018)为同一个种。

关 键 词:海带  转录单元内间隔区  PCR扩增  序列分析  系统进化  进化枝

PCR amplification and sequence analysis of ITS regions ofcultivated Laminaria strains and L. Longissima
Wang Wenjun,Wang Guangce,Zhang Baoyu,Jiang Benyu,Zeng Chengkui. PCR amplification and sequence analysis of ITS regions ofcultivated Laminaria strains and L. Longissima[J]. High Technology Letters, 2005, 15(4): 95-101
Authors:Wang Wenjun  Wang Guangce  Zhang Baoyu  Jiang Benyu  Zeng Chengkui
Abstract:The internal transcribed spacer (ITS) regions of nuclear ribosomal DNA (including 5.8 S rDNA) of 6 cultivated Laminaria strains (CUL002, CUL860, CUL1170, CUL901, CUL018) with a clear genetic background and variant phenotype and L. longissima living in Chinese sea area were amplified and sequenced. The obtained ITS sequences including 5.8 S rDNA amplified by polymerase chain reaction (PCR) were conformed by NCBI BLAST. The phylogenetic relationships of 7 sequenced ITS sequences together with that of 10 selected strains (representing 7 Laminaria species) and Undaria peterseniana downloaded from GenBank were constructed. Undaria peterseniana was designated as outgroup. The result indicated that: (1) There was little diversity in ITS regions of 6 cultivated Laminaria strains. The ITS1+5 8 S rDNA sequences were exactly the same as that of L. Japonica (AF319018, Japan), however, the ITS2 regions possessed individual variation. Futhermore, the ITS + 5 8 S rDNA sequences of CUL901, CUL860 and CUL1170 were identical. (2) The ITS and 5 8 S rDNA sequence of L. longissima was absolutely identical to that of L. japonica (AF319018, Japan), and it was supposed to be a variation of L. japonica. The ITS + 5.8 S rDNA-based phylogenetic tree showed that: 14 selected Laminaria strains were divided into 2 strongly-supported monophyletic clades.
Keywords:Laminaria   ITS region   PCR amplification   sequence analysis   phylogeny   clade
本文献已被 CNKI 维普 万方数据 等数据库收录!
设为首页 | 免责声明 | 关于勤云 | 加入收藏

Copyright©北京勤云科技发展有限公司  京ICP备09084417号