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Correlation ranking and stepwise regression procedures in principal components artificial neural networks modeling with application to predict toxic activity and human serum albumin binding affinity
Authors:
Omar Deeb
Affiliation:
Faculty of Pharmacy, Al-Quds University, P.O. Box 20002, Jerusalem, Palestine
Abstract:
Keywords:
ANN
artificial neural networks
CR
correlation ranking
CR-PC-ANN
correlation ranking principal components artificial neural networks
CR-PC-ANN(C)
correlation ranking principal components artificial neural networks based on the combined approach
CR-PC-ANN(I)
stepwise regression principal components artificial neural networks based on the individual approach
FE
feature extraction
FS
feature selection
HOMO
highest occupied molecular orbital
HSA
human serum albumin
log IC
50
logarithm of half maximal inhibitory concentration
LMO-CV
leave-many-out cross validation
log K'hsa
logarithm of HSA binding affinity
LUMO
lowest unoccupied molecular orbital
MLR
multiple linear regression
PC
principal component
PC-ANN
principal components artificial neural networks
PCA
principal components analysis
PCA(C)
principal components analysis based on the combined approach
PCA(I)
principal components analysis based on the individual approach
PCR
principal component regression
R
2
coefficient of determination
R
2
CV
cross-validation coefficient of determination
RMSE
root mean square error
R
2
p
square of the correlation coefficient between the predicted and actual activities
SR
stepwise regression
SR-PC-ANN
stepwise regression principal components artificial neural networks
SR-PC-ANN(C)
stepwise regression principal components artificial neural networks based on the combined approach
SR-PC-ANN(I)
stepwise regression principal components artificial neural networks based on the individual approach
SVD
singular value decomposition
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