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Simulated Bacterially-Inspired Problem Solving – The Behavioural Domain
Authors:R. C. Paton  C. Vlachos  Q. H. Wu  J. R. Saunders
Affiliation:(1) Department of Computer Science, University of Liverpool, L69 3BX, UK;(2) Department of Electrical Engineering and Electronics, University of Liverpool, L69 3BX, UK;(3) School of Biological Sciences, University of Liverpool, L69 3BX, UK
Abstract:Bacterial populations meet the challenges of dynamic spatially heterogeneous environments with fluctuating biotic and abiotic factors in a number of ways. The motivation for the work presented here has been to transfer ideas from bacterial adaptability and evolvability to computational problem solving. Following a brief comment on some examples of the ways bacteria solve problems, a bacterially-inspired computational architecture for simulating aspects of problem solving is described. We then examine three case studies. The first, a study of the mutational impact of a remediation to toxic (fitness-reducing) material, highlights how a sufficiently pre-engineered adaptive system can solve a difficult problem quite easily. The second study looks at why it is difficult to evolve complex problem solving behaviours and how artificial selection mechanisms coupled with pre-engineering the system can help. Specifically, this refers to quorum sensing and tactic behaviours. A further study looked at ways in which a quorum sensing analogue could help computational agents find multiple peaks in a landscape. The paper concludes with a discussion of an investigation of bacteria that had both quorum sensing and tactic capabilities.
Keywords:bio-inspired computing  learning classifier system  quorum sensing  tactic behaviour
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