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基于锁核苷酸(LNA)增敏的植烟土壤中烟草黑胫病菌定量PCR检测方法
引用本文:刘芳,宋纪真,范艺宽,牟文君,奚家勤,胡利伟.基于锁核苷酸(LNA)增敏的植烟土壤中烟草黑胫病菌定量PCR检测方法[J].烟草科技,2015,48(12):14-19.
作者姓名:刘芳  宋纪真  范艺宽  牟文君  奚家勤  胡利伟
作者单位:1.1. 中国烟草总公司郑州烟草研究院, 郑州高新技术产业开发区枫杨街2号 450001;2.2. 中国烟草总公司河南省公司, 郑州市政七街7号 450008
基金项目:中国烟草总公司河南省公司科技项目“烟草黑胫病防控关键技术研发与应用”(122013DS0320)。
摘    要:为了快速有效地检测植烟土壤中的烟草黑胫病菌的定殖数量,以一种锁核苷酸(LNA)引物为基础,进行了植烟土壤中烟草黑胫病菌数量的定量PCR 检测方法研究。结果表明:①与普通DNA引物相比,LNA 引物提高了PCR 反应的退火温度,减少了引物二聚体和非特异性产物的形成,提高了烟草黑胫病菌分子检测的灵敏度与特异性;②定量分析检测出14 个烟草-大蒜轮作土样中烟草黑胫病菌的定殖数量为2.76×103~5.20×104个/g,且在4~5 h 内完成检测,具有较高的灵敏度和检测效率。 

关 键 词:植烟土壤    烟草黑胫病菌    锁核苷酸(LNA)    荧光定量PCR    分子检测
收稿时间:2015-01-19

A Quantitative PCR Method for Detecting Phytophthora parasitica var. nicotianae in Tobacco Planting Soil Based on LNA Sensitization
LIU Fang,SONG Jizhen,FAN Yikuan,MOU Wenjun,XI Jiaqin,HU Liwei.A Quantitative PCR Method for Detecting Phytophthora parasitica var. nicotianae in Tobacco Planting Soil Based on LNA Sensitization[J].Tobacco Science & Technology,2015,48(12):14-19.
Authors:LIU Fang  SONG Jizhen  FAN Yikuan  MOU Wenjun  XI Jiaqin  HU Liwei
Affiliation:1.1. Zhengzhou Tobacco Research Institute of CNTC, Zhengzhou 450001, China;2.2. Henan Province Company of CNTC, Zhengzhou 450008, China
Abstract:In order to efficiently detect the colonization of Phytophthora parasitica var. nicotianae in tobacco planting soil, a quantitative PCR method was researched based on locked nucleic acid (LNA) primer. The results showed that: 1) Comparing with conventional DNA primers, the LNA primer raised PCR reaction annealing temperature, reduced the formation of primer dimers and non-specific products, and improved the sensitivity and specificity of detection. 2)LNA quantitative PCR analysis revealed that the concentration of Phytophthora parasitica var. nicotianae in 14 soil samples of tobacco / garlic rotation fields ranged from 2.76×103 to 5.20×104 per gram. This method is sensitive and efficient, the detection can be completed within 4-5 hours. 
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