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Incremental wrapper-based gene selection from microarray data for cancer classification
Authors:Roberto Ruiz, Jos   C. Riquelme,Jesú  s S. Aguilar-Ruiz
Affiliation:

aDepartment of Computer Science, University of Seville, Avda. Reina Mercedes s/n. 41012 Seville, Spain

bPolytechnic, Pablo de Olavide University, Ctra. Utrera, km 1, 41013 Seville, Spain

Abstract:Gene expression microarray is a rapidly maturing technology that provides the opportunity to assay the expression levels of thousands or tens of thousands of genes in a single experiment. We present a new heuristic to select relevant gene subsets in order to further use them for the classification task. Our method is based on the statistical significance of adding a gene from a ranked-list to the final subset. The efficiency and effectiveness of our technique is demonstrated through extensive comparisons with other representative heuristics. Our approach shows an excellent performance, not only at identifying relevant genes, but also with respect to the computational cost.
Keywords:Microarray   Gene selection   Classification   Feature selection
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