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HIV and Proteomics: What We Have Learned from High Throughput Studies
Authors:Kinga Grabowska  Emma Harwood  Pawel Ciborowski
Affiliation:1. Laboratory of Virus Molecular Biology, Intercollegiate Faculty of Biotechnology, University of Gdansk, Gdansk, 80-307 Poland

Department of Pharmacology and Experimental Neuroscience, College of Medicine, University of Nebraska Medical Center, Omaha, NE, 68198-5800 USA;2. Department of Pharmacology and Experimental Neuroscience, College of Medicine, University of Nebraska Medical Center, Omaha, NE, 68198-5800 USA

Abstract:The accelerated development of technology over the last three decades has driven biological sciences to high-throughput profiling experiments, now broadly referred to as systems biology. The unprecedented improvement of analytical instrumentation has opened new avenues for more complex experimental designs and expands the knowledge in genomics, proteomics, and other omics fields. Despite the collective efforts of hundreds of researchers, gleaning all the expected information from omics experiments is still quite far. This paper summarizes what has been learned from high-throughput proteomics studies thus far, and what is believed should be done to reveal even more valuable information from such studies. It is drawn from the background in using proteomics to study human immunodeficiency virus 1 infection of macrophages and/or T cells, but it is believed that some conclusions will be more broadly applicable.
Keywords:human immunodeficiency virus  innate immunity  macrophage  proteomics  systems biology  virus
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