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Random-coiled conformation of polypeptide chains
Authors:Masahito Oka  Yoshihiro Baba  Akihiro Kagemoto  Akio Nakajima
Affiliation:(1) Department of General Education, Osaka Institute of Technology, Omiya, Asahi-ku, 535 Osaka, Japan;(2) Department of Applied Chemistry, Osaka Institute of Technology, Omiya, Asahi-ku, 535 Osaka, Japan
Abstract:Summary Random-coiled conformation of poly(L-leucine), which has gamma-branched side-chain, was theoretically analyzed by a conformational energy calculation based on intra-residue interactions. Calculated characteristic ratio 7.62 was obtained by using the transformation matrix statistically averaged over the entire side-chain conformational space of L-Leu residue. This value is smaller than those of poly(L-phenylalanine) (11.24) and poly(L-tyrosine) (12.33) which have gamma-branched side-chain.
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