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Computational proteomics on the grid
Authors:Eduardo Huedo  Ugo Bastolla  Ruben S. Montero  Ignacio M. Llorente
Affiliation:(1) Centro de Astrobiología (CSIC-INTA), 28850 Torrejón de Ardoz, Spain;(2) Dpto. de Arquitectura de Computadores y Automática, Universidad Complutense, 28040 Madrid, Spain
Abstract:The large number of protein sequences, provided by genomic projects at an increasing pace, constitutes a challenge for large scale computational studies of protein structure and thermodynamics. Grid technology is very suitable to face this challenge, since it provides a way to access the resources needed in compute and data intensive applications. In this work, we concentrate on the grid-aware implementation of a protein structure prediction algorithm.
Keywords:Bioinformatics  Grid  Adaptive Scheduling  Adaptive Execution
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