Scopira: an open source C++ framework for biomedical data analysis applications

In many biomedical research laboratories, data analysis and visualization algorithms are typical prototypes using an interpreted programming language. If performance becomes an issue, they are ported to C and integrated with interpreted systems, not fully utilizing object‐oriented software development. This paper presents an overview of Scopira, an open source C++ framework suitable for biomedical data analysis and visualization. Scopira provides high‐performance end‐to‐end application development features, in the form of an extensible C++ library. This library provides general programming utilities, numerical matrices and algorithms, parallelization facilities, and graphical user interface elements. Copyright © 2008 John Wiley & Sons, Ltd.