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面向荧光显微图像的斑点检测
引用本文:何柯材,徐琳,江金康,陶禹川,王学渊. 面向荧光显微图像的斑点检测[J]. 计算机系统应用, 2024, 33(8): 205-213
作者姓名:何柯材  徐琳  江金康  陶禹川  王学渊
作者单位:西南科技大学 信息工程学院, 绵阳 621000;北京化工大学 经济管理学院, 北京 100029
基金项目:四川省自然科学基金(2023NSFSC0466)
摘    要:实体肿瘤学中, 利用荧光原位杂交(FISH)技术处理后的间期细胞核荧光显微图像上, DNA扩增往往呈现为衍射极限斑点, 成像条件限制了图像质量, 导致图像信噪比较低、背景干扰严重且存在非斑点结构干扰. 设计适用的斑点检测方法, 提供客观且定量的数据, 有助于医生对于癌症病情的诊断. 算法首先采用3层小波多尺度求和对荧光图像去噪, 随后利用多尺度高斯拉普拉斯算子增强斑点区域, 最后通过4个方向的单边二阶高斯核抑制非斑点区域, 完成斑点检测. 实验结果表明, 对于自建数据库中83张图像, 算法平均F分数达到0.96, 平均运行时间0.5 s以下.

关 键 词:荧光显微图像  斑点检测  图像降噪  图像增强
收稿时间:2024-02-23
修稿时间:2024-03-19

Blob Detection for Fluorescence Microscopy Image
HE Ke-Cai,XU Lin,JIANG Jin-Kang,TAO Yu-Chuan,WANG Xue-Yuan. Blob Detection for Fluorescence Microscopy Image[J]. Computer Systems& Applications, 2024, 33(8): 205-213
Authors:HE Ke-Cai  XU Lin  JIANG Jin-Kang  TAO Yu-Chuan  WANG Xue-Yuan
Affiliation:School of Information Engineering, Southwest University of Science and Technology, Mianyang 621000, China;School of Management and Economics, Beijing University of Chemical Technology, Beijing 100029, China
Abstract:In solid oncology, on fluorescence microscopy images of interphase nuclei processed with fluorescence in situ hybridization (FISH) technology, DNA amplification often appears as diffraction-limited blobs. Imaging conditions limit image quality, resulting in a low image signal-to-noise ratio of the image, serious background interference, and non-blob structure interference. Designing suitable blob detection methods to provide objective and quantitative data helps doctors diagnose cancer. The algorithm first uses three-layer wavelet multiscale summation to denoise the fluorescence image, then uses the multiscale Laplacian of Gaussian operator to enhance the blob area, and finally suppresses the non-blob area through unilateral second-order Gaussian kernels in four directions to complete blob detection. Experimental results show that for 83 images in the self-built database, the average F-score reaches 0.96, and the average running time is less than 0.5 s.
Keywords:fluorescence microscopy image  blob detection  image denoising  image enhancement
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