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Diverse Morphologies of Self‐Assemblies from Homoditopic 1,18‐Nucleotide‐Appended Bolaamphiphiles: Effects of Nucleobases and Complementary Oligonucleotides
Authors:Rika Iwaura  Tomohiko Iizawa  Hiroyuki Minamikawa  Mayumi Ohnishi‐Kameyama  Toshimi Shimizu
Affiliation:1. National Food Research Institute (NFRI) National Agriculture and Food Research Organization (NARO) 2‐1‐12 Kannondai, Tsukuba, Ibaraki, 305‐8642 (Japan);2. Precursory Research for Embryonic Science and Technology (PRESTO) Japan Science and Technology Agency (JST) 4‐1‐8 Honcho Kawaguchi, Saitama, 332‐0012 (Japan);3. Nanotube Research Center (NTRC) National Institute of Advanced Industrial Science and Technology Tsukuba Central 5, 1‐1‐1 Higashi Tsukuba Ibaraki, 305‐8565 (Japan);4. Solution‐Oriented Research for Science and Technology (SORST) Japan Science and Technology Agency (JST) 4‐1‐8 Honcho Kawaguchi, Saitama, 332‐0012 (Japan)
Abstract:The synthesis of 1,18‐nucleotide‐appended bolaamphiphiles (1 , 2 , 4 , and 6) is reported, in which a 3′‐phosphorylated guanidine, adenosine, thymidine, or cytidine is connected to each end of an octadecamethylene chain. Single‐component self‐assemblies and binary self‐assemblies with the complementary oligonucleotides dC 20 , dT 20 , dA 20 , and dG 20 are studied by atomic force microscopy, powder X‐ray diffraction analysis, temperature‐dependent UV absorption, circular dichroism, and attenuated total‐reflection Fourier‐transform infrared spectroscopy. The single‐component self‐assembly of 1 forms a two‐dimensional sheet, whereas the binary self‐assembly 1 / dC 20 gives helical nanofibers. Non‐helical nanofibers are observed for the single‐component self‐assemblies of 2 and 4 , and helical nanofibers form from the binary self‐assembly 2 / dT 20 . Interestingly, helical nanorod structures are obtained from the binary self‐assembly 4 / dA 20 , and the aligned nanorods form a nematic phase. The single‐component and binary self‐assemblies from 6 give unilamellar vesicles owing to a lack of stacking interaction between the cytosine moieties.
Keywords:amphiphiles  nanomaterials  oligonucleotides  self‐assembly  supramolecular chemistry
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