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基于ReliefF和蚁群算法的特征基因选择方法
引用本文:吴辰文,李晨阳,郭叔瑾,闫光辉. 基于ReliefF和蚁群算法的特征基因选择方法[J]. 计算机应用研究, 2018, 35(9)
作者姓名:吴辰文  李晨阳  郭叔瑾  闫光辉
作者单位:兰州交通大学 电子与信息工程学院,兰州交通大学 电子与信息工程学院,兰州交通大学 电子与信息工程学院,兰州交通大学 电子与信息工程学院
基金项目:国家自然科学(61163010),甘肃自然科学(1308RJZA111)
摘    要:针对高维小样本的DNA微阵列数据多分类问题,提出一种基于ReliefF和蚁群算法的特征基因选择方法(ReliefF and Ant Colony Optimization, ReFACO)。该方法首先采用ReliefF算法评估特征权重,根据阈值筛选出无关基因;然后引入改进的蚁群算法,在迭代改进的过程中寻找最优基因子集;最后利用经典分类算法对维数约简后的数据分类识别。经实验证明,该方法可以有效地剔除无关和冗余基因,并利用较少特征基因达到较高多分类效果。

关 键 词:DNA微阵列数据;ReliefF算法;蚁群算法;特征选择
收稿时间:2017-04-18
修稿时间:2018-08-06

Feature Gene Selection Method Based on ReliefF and Ant Colony Optimization
WU Chen-wen,LI Chen-yang,GUO Shu-jin and YAN Guang-hui. Feature Gene Selection Method Based on ReliefF and Ant Colony Optimization[J]. Application Research of Computers, 2018, 35(9)
Authors:WU Chen-wen  LI Chen-yang  GUO Shu-jin  YAN Guang-hui
Affiliation:School of Electronics and Information Engineering,Lanzhoujiaotong University,,,
Abstract:Aiming at the multi-classification problem of DNA microarray data with the characteristic of high dimension and small sample, this paper proposed a feature gene selection algorithm based on ReliefF and ant colony optimization (ReFACO). The method adopted ReliefF algorithm to evaluate the feature weights, and select the irrelevant genes based on the threshold, introduced an improved ant colony algorithm to find the optimal subset of genes in the process of iteration and improvement, used classical classification algorithms to classify and identify the data set, dimensions of which had been reduced. Experimental results show that the method can eliminate irrelevant and redundant genes effectively, and achieve a higher classification performance with less characteristic genes.
Keywords:DNA microarray data   ReliefF algorithm   ant colony optimization   feature selection
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