Impact of nutrients on peatland GPP estimations using MODIS time series data

Time series of satellite sensor-derived data can be used in the light use efficiency (LUE) model for gross primary productivity (GPP). The LUE model and a closely related linear regression model were studied at an ombrotrophic peatland in southern Sweden. Eddy covariance and chamber GPP, incoming and reflected photosynthetic photon flux density (PPFD), field-measured spectral reflectance, and data from the Moderate Resolution Imaging Spectroradiometer (MODIS) were used in this study. The chamber and spectral reflectance measurements were made on four experimental treatments: unfertilized control (Ctrl), nitrogen fertilized (N), phosphorus fertilized (P), and nitrogen plus phosphorus fertilized (NP). For Ctrl, a strong linear relationship was found between GPP and the photosynthetically active radiation absorbed by vegetation (APAR) (R² = 0.90). The slope coefficient (ε_s, where s stands for “slope”) for the linear relationship between seasonal time series of GPP and the product of the normalized difference vegetation index (NDVI) and PPFD was used as a proxy for the light use efficiency factor (ε). There were differences in ε_s depending on the treatments with a significant effect for N compared to Ctrl (ANOVA: p = 0.042, Tukey's: p ≤ 0.05). Also, ε_s was linearly related to the cover degree of vascular plants (R² = 0.66). As a sensitivity test, the regression coefficients (ε_s and intercept) for each treatment were used to model time series of 16-day GPP from the product of MODIS NDVI and PPFD. Seasonal averages of GPP were calculated for 2005, 2006, and 2007, which resulted in up to 19% higher average GPP for the fertilization treatments compared to Ctrl. The main conclusion is that the LUE model and the regression model can be applied in peatlands but also that temporal and spatial changes in ε or the regression coefficients should be considered.     

Comparison of multiple models for remote sensing of carbon exchange using MODIS data in conifer-dominated forests

Boreal forests in the northern hemisphere provide important sinks for storing carbon dioxide (CO₂). However, the size and distribution of these sinks remain uncertain. In particular, many remote-sensing models show a strong bias in the simulation of carbon fluxes for evergreen needleleaf forest. The objective of this study is to improve these predictive models for accurately quantifying temporal changes in the net ecosystem exchange (NEE) of conifer-dominated forest solely based on satellite remote sensing, including the Moderate Resolution Imaging Spectroradiometer (MODIS) Terra daytime land-surface temperature (LST), night-time LST′, enhanced vegetation index (EVI), land–surface water index (LSWI), fraction of absorbed photosynthetically active radiation (FPAR), and leaf area index (LAI). Considering that the component fluxes, gross primary production (GPP), and ecosystem respiration (R_e), are strongly influenced by vegetation phenology, seasonality information was extracted from time-series MODIS EVI data based on non-linear least-squares fits of asymmetric Gaussian model functions with a software package for analysing the time-series of satellite sensor data (TIMESAT). The results indicated that models directly incorporating phenological information failed to improve their performance for temperate deciduous forest. Instead, three methods to retrieve the component fluxes – GPP and R_e – including direct estimates, models incorporating the phenological information, and models developed based on the threshold value (LST 273 K), were explored respectively. All methods improved NEE estimates markedly and models developed based on the threshold value performed best, and provided a future framework for accurate remote sensing of NEE in evergreen forest.     

Comparison of MODIS, eddy covariance determined and physiologically modelled gross primary production (GPP) in a Douglas-fir forest stand

Quantification of the magnitude of net terrestrial carbon (C) uptake, and how it varies inter-annually, is an important question with future potential sequestration influenced by both increased atmospheric CO₂ and changing climate. However the assessment of differences in measured and modeled C accumulation is a challenging task due to the significant fine scale variation occurring in terrestrial productivity due to soil, climate and vegetation characteristics as well as difficulties in measuring carbon accumulation over large spatial areas. The Moderate Resolution Imaging Spectroradiometer (MODIS) offers a means of monitoring gross primary production (GPP), both spatially and temporally, routinely from space. However it is critical to compare and contrast the temporal dynamics of the C and water fluxes with those measured from ground-based networks, or estimated using physiological models. In this paper, using a number of approaches, our objective is to determine if any systematic biases exists in either the MODIS, or the modeled estimates of fluxes, relative to the measurements made over an evergreen, needleleaf temperate rainforest on Vancouver Island, Canada. Results indicate that 8-day GPP as predicted with a simple physiological model (3PGS), forced using local meteorology and canopy characteristics, matched measured fluxes very well (r² = 0.86, p < 0.001) with no significant difference between eddy covariance (EC) and modeled GPP (p < 0.001). In addition, modeled water supply closely matched measured relative available soil water content at the site. Using canopy characteristics from the MODIS fraction of photosynthetically active radiation (fPAR) algorithm, slightly reduced the correspondence of the predictions due to a large number of unsuccessful retrievals (83%) due to sun angle, snow and cloud. Predictions of GPP based on the MODIS GPP algorithm, forced using local meteorology and canopy characteristics, were also highly correlated with EC measurements (r² = 0.89, p < 0.001) however these estimates were biased under predicting GPP. Estimates of GPP based on the most recent MODIS reprocessing (collection 4.5) remained highly correlated (r² = 0.88, p < 0.001) yet were also the most biased with the estimates being 30% less than the EC-measured GPP. Most of the variance in GPP at the site was explained by the absorbed photosynthetically active radiation. We also compared the nighttime respiration as measured over 2 years at the site with the minimum 8-day MODIS land surface temperature and found a significant relationship (r² = 0.57), similar to other studies.     

Comparison of multiple models for estimating gross primary production using MODIS and eddy covariance data in Harvard Forest

Gross primary production (GPP) defined as the overall rate of fixation of carbon through the process of vegetation photosynthesis is important for carbon cycle and climate change research. Three models, the Vegetation Photosynthesis Model (VPM), the Temperature and Greenness (TG) model and the Vegetation Index (VI) model have been compared for the estimation of GPP in Harvard Forest from 2003 to 2006 using climate variables acquired by eddy covariance (EC) measurements and Moderate Resolution Imaging Spectroradiometer (MODIS) satellite images. All these models provide more reliable estimates of GPP than that of MODIS GPP product. High Pearsons correlation coefficients r equal to 0.94, 0.92 and 0.90 are observed for the VPM, the TG and the VI model, respectively. Relationships between GPP and land surface temperature (LST, R² = 0.72), and vapor pressure deficit (VPD, R² = 0.45) indicate that climate variables are important for GPP estimation. Due to proper characterization of temperature, water stress and leaf age by three scalars, VPM best follows the seasonal variations of GPP. By incorporation of the MODIS surface reflectance and LST product, the TG model is the most suitable choice for areas without prior knowledge as it is based entirely on remote sensing observations. Results from the VI model demonstrate the possibility of using a single vegetation index for light use efficiency (LUE) estimation in deciduous forest that is of high spatial heterogeneity. The validation and comparison of models will be helpful in development of future GPP models using combinations of climate variables and/or remote sensing observations.     

A new model of gross primary productivity for North American ecosystems based solely on the enhanced vegetation index and land surface temperature from MODIS

Many current models of ecosystem carbon exchange based on remote sensing, such as the MODIS product termed MOD17, still require considerable input from ground based meteorological measurements and look up tables based on vegetation type. Since these data are often not available at the same spatial scale as the remote sensing imagery, they can introduce substantial errors into the carbon exchange estimates. Here we present further development of a gross primary production (GPP) model based entirely on remote sensing data. In contrast to an earlier model based only on the enhanced vegetation index (EVI), this model, termed the Temperature and Greenness (TG) model, also includes the land surface temperature (LST) product from MODIS. In addition to its obvious relationship to vegetation temperature, LST was correlated with vapor pressure deficit and photosynthetically active radiation. Combination of EVI and LST in the model substantially improved the correlation between predicted and measured GPP at 11 eddy correlation flux towers in a wide range of vegetation types across North America. In many cases, the TG model provided substantially better predictions of GPP than did the MODIS GPP product. However, both models resulted in poor predictions for sparse shrub habitats where solar angle effects on remote sensing indices were large. Although it may be possible to improve the MODIS GPP product through improved parameterization, our results suggest that simpler models based entirely on remote sensing can provide equally good predictions of GPP.     

Modelling light use efficiency using vegetation index and land surface temperature from MODIS in Harvard Forest

Light use efficiency (LUE) is of great importance for carbon cycle and climate change research. This study presents a new LUE model incorporation of vegetation indices (VIs) and land surface temperature (LST) derived from the Moderate-Resolution Imaging Spectroradiometer (MODIS) in Harvard Forest. Three indices, including the normalized difference vegetation index (NDVI), the two-band enhanced vegetation index (EVI2) and the soil-adjusted vegetation index (SAVI), were selected as indicators of forest canopy greenness. A single VI provided moderate estimates of LUE with coefficients of determination (R ²) 0.6219, 0.7094 and 0.7502 for NDVI, EVI2 and SAVI, respectively. Our results demonstrated that canopy LUE was related both to the canopy photosynthesis efficiency and air temperature (R ²?=?0.5634). Therefore, the MODIS LST product was incorporated as a surrogate for monitoring of environmental stresses as the observed relationship between LST and both air temperature (R ²?=?0.8828) and vapour pressure deficit (VPD) (R ²?=?0.6887). The new model in terms of (VI)?×?(Scaled (LST)) provided improved estimates of LUE estimation with R ² of 0.7349, 0.7561 and 0.7879 for NDVI, EVI2 and SAVI, respectively. The results will be useful for the development of future LUE models based entirely on remote-sensing observations.     

Mapping tree and shrub leaf area indices in an ombrotrophic peatland through multiple endmember spectral unmixing

Leaf area index (LAI) is an important parameter used by most process-oriented ecosystem models. LAI of forest ecosystems has routinely been mapped using spectral vegetation indices (SVI) derived from remote sensing imagery. The application of SVI-based approaches to map LAI in peatlands presents a challenge, mainly due to peatlands characteristic multi-layer canopy comprising shrubs and open, discontinuous tree canopies underlain by a continuous ground cover of different moss species, which reduces the greenness contrast between the canopy and the background.Our goal is to develop a methodology to map tree and shrub LAI in peatlands and similar ecosystems based on multiple endmember spectral mixture analysis (MESMA). This new mapping method is validated using LAI field measurements from a precipitation-fed (ombrotrophic) peatland near Ottawa, Ontario, Canada. We demonstrate first that three commonly applied SVI are not suitable for tree and shrub LAI mapping in ombrotrophic peatlands. Secondly, we demonstrate for a three-endmember model the limitations of traditional linear spectral mixture analysis (SMA) due to the unique and widely varying spectral characteristics of Sphagnum mosses, which are significantly different from vascular plants. Next, by using a geometric-optical radiative transfer model, we determine the nature of the equation describing the empirical relationship between shadow fraction and tree LAI using nonlinear ordinary least square (OLS) regression. We then apply this equation to describe the empirical relationships between shadow and shrub fractions obtained from mixture decomposition with SMA and MESMA, respectively, and tree and shrub LAI, respectively. Less accurate fractions obtained from SMA result in weaker relationships between shadow fraction and tree LAI (R² = 0.61) and shrub fraction and shrub LAI (R² = 0.49) compared to the same relationships based on fractions obtained from MESMA with R² = 0.75 and R² = 0.68, respectively. Cross-validation of tree LAI (R² = 0.74; RMSE = 0.48) and shrub LAI (R² = 0.68; RMSE = 0.42) maps using fractions from MESMA shows the suitability of this approach for mapping tree and shrub LAI in ombrotrophic peatlands. The ability to account for a spectrally varying, unique Sphagnum moss ground cover during mixture decomposition and a two layer canopy is particularly important.     

Modeling gross primary production of temperate deciduous broadleaf forest using satellite images and climate data

Net ecosystem exchange (NEE) of CO₂ between the atmosphere and forest ecosystems is determined by gross primary production (GPP) of vegetation and ecosystem respiration. CO₂ flux measurements at individual CO₂ eddy flux sites provide valuable information on the seasonal dynamics of GPP. In this paper, we developed and validated the satellite-based Vegetation Photosynthesis Model (VPM), using site-specific CO₂ flux and climate data from a temperate deciduous broadleaf forest at Harvard Forest, Massachusetts, USA. The VPM model is built upon the conceptual partitioning of photosynthetically active vegetation and non-photosynthetic vegetation (NPV) within the leaf and canopy. It estimates GPP, using satellite-derived Enhanced Vegetation Index (EVI), Land Surface Water Index (LSWI), air temperature and photosynthetically active radiation (PAR). Multi-year (1998-2001) data analyses have shown that EVI had a stronger linear relationship with GPP than did the Normalized Difference Vegetation Index (NDVI). Two simulations of the VPM model were conducted, using vegetation indices from the VEGETATION (VGT) sensor onboard the SPOT-4 satellite and the Moderate Resolution Imaging Spectroradiometer (MODIS) sensor onboard the Terra satellite. The predicted GPP values agreed reasonably well with observed GPP of the deciduous broadleaf forest at Harvard Forest, Massachusetts. This study highlighted the biophysical performance of improved vegetation indices in relation to GPP and demonstrated the potential of the VPM model for scaling-up of GPP of deciduous broadleaf forests.     

Developing a continental-scale measure of gross primary production by combining MODIS and AmeriFlux data through Support Vector Machine approach

Remote sensing is a potentially powerful technology with which to extrapolate eddy covariance-based gross primary production (GPP) to continental scales. In support of this concept, we used meteorological and flux data from the AmeriFlux network and Support Vector Machine (SVM), an inductive machine learning technique, to develop and apply a predictive GPP model for the conterminous U.S. In the following four-step process, we first trained the SVM to predict flux-based GPP from 33 AmeriFlux sites between 2000 and 2003 using three remotely-sensed variables (land surface temperature, enhanced vegetation index (EVI), and land cover) and one ground-measured variable (incident shortwave radiation). Second, we evaluated model performance by predicting GPP for 24 available AmeriFlux sites in 2004. In this independent evaluation, the SVM predicted GPP with a root mean squared error (RMSE) of 1.87 gC/m²/day and an R² of 0.71. Based on annual total GPP at 15 AmeriFlux sites for which the number of 8-day averages in 2004 was no less than 67% (30 out of a possible 45), annual SVM GPP prediction error was 32.1% for non-forest ecosystems and 22.2% for forest ecosystems, while the standard Moderate Resolution Imaging Spectroradiometer GPP product (MOD17) had an error of 50.3% for non-forest ecosystems and 21.5% for forest ecosystems, suggesting that the regionally tuned SVM performed better than the standard global MOD17 GPP for non-forest ecosystems but had similar performance for forest ecosystems. The most important explanatory factor for GPP prediction was EVI, removal of which increased GPP RMSE by 0.85 gC/m²/day in a cross-validation experiment. Third, using the SVM driven by remote sensing data including incident shortwave radiation, we predicted 2004 conterminous U.S. GPP and found that results were consistent with expected spatial and temporal patterns. Finally, as an illustration of SVM GPP for ecological applications, we estimated maximum light use efficiency (e_max), one of the most important factors for standard light use efficiency models, for the conterminous U.S. by integrating the 2004 SVM GPP with the MOD17 GPP algorithm. We found that e_max varied from ∼ 0.86 gC/MJ in grasslands to ∼ 1.56 gC/MJ in deciduous forests, while MOD17 e_max was 0.68 gC/MJ for grasslands and 1.16 gC/MJ for deciduous forests, suggesting that refinements of MOD17 e_max may be beneficial.     

Large area monitoring with a MODIS-based Disturbance Index (DI) sensitive to annual and seasonal variations

Disturbance of the vegetated land surface, due to factors such as fire, insect infestation, windthrow and harvesting, is a fundamental driver of the composition forested landscapes with information on disturbance providing critical insights into species composition, vegetation condition and structure. Long-term climate variability is expected to lead to increases in both the magnitude and distribution of disturbances. As a consequence it is important to develop monitoring systems to better understand these changes in the terrestrial biosphere as well to inform managers about disturbance agents more typically captured through specific monitoring programs (such as focused on insect, fire, or agricultural conditions). Changes in the condition, composition and distribution pattern of vegetation can lead to changes in the spectral and thermal signature of the land surface. Using a 6-year time series of MODerate-resolution Imaging Spectroradiometer (MODIS) Land Surface Temperature (LST) and Enhanced Vegetation Index (EVI) data we apply a previously proposed Disturbance Index (DI) which has been shown to be sensitive to both continuous and discontinuous change. Using Canada as an example area, we demonstrate the capacity of this Disturbance Index to monitor land dynamics over time. As expected, our results confirm a significant relationship between area flagged as disturbed by the index and area burnt as estimated from other satellite sources (R² = 0.78, p < 0.0001). The DI also demonstrates a sensitivity to capture and depict changes related to insect infestations. Further, on a regional basis the DI produces change information matching measured wide-area moisture conditions (i.e., drought) and corresponding agricultural outputs. These findings indicate that for monitoring a large area, such as Canada, the time series based DI is a useful tool to aid in change detection and national monitoring activities.     

Monitoring turbidity in Tampa Bay using MODIS/Aqua 250-m imagery

We developed an approach to map turbidity in estuaries using a time series (May 2003 to April 2006) of 250-m resolution images from the Moderate Resolution Imaging Spectroradiometer (MODIS) on NASA's Aqua satellite, using Tampa Bay as a case study. Cross-calibration of the MODIS 250-m data (originally designed for land use) with the well-calibrated MODIS 1-km ocean data showed that the pre-launch radiometric calibration of the 250-m bands was adequate. A simple single scattering atmospheric correction provided reliable retrievals of remote sensing reflectance at 645 nm (0.002 < R_rs(645) < 0.015 sr^− 1, median bias = − 7%, slope = 0.95, intercept = 0.00, r² = 0.97, n = 15). A more rigorous approach, using a multiple scattering atmospheric correction of the cross-calibrated at-sensor radiances, retrieved similar R_rs(645). R_rs(645) estimates, after stringent data quality control, showed a close correlation with in situ turbidity (turbidity = 1203.9 × R_rs(645)^1.087, 0.9 < turbidity < 8.0 NTU, r² = 0.73, n = 43). MODIS turbidity imagery derived using the developed approach showed that turbidity in Hillsborough Bay (HB) was consistently higher than that in other sub-regions except in August and September, when higher concentrations of colored dissolved organic matter seem to have caused underestimates of turbidity. In comparison, turbidity in Middle Tampa Bay (MTB) was generally lowest among the Bay throughout the year. Both Old Tampa Bay (OTB) and Low Tampa Bay (LTB) showed marked seasonal variations with higher turbidity in LTB during the dry season and in OTB during the wet season, respectively. This seasonality is linked to wind-driven bottom resuspension events in lower portion of the Bay and river inputs of sediments in the upper portion of the Bay. The Bay also experiences significant interannual variation in turbidity, which was attributed primarily to changes in wind forcing. Compared with the once-per-month, non-synoptic in situ surveys, synoptic and frequent sampling facilitated by satellite remote sensing provides improved assessments of turbidity patterns and thus a valuable tool for operational monitoring of water quality of estuarine and coastal waters such as in Tampa Bay.     

Multi-sensor model-data fusion for estimation of hydrologic and energy flux parameters

Model-data fusion offers considerable promise in remote sensing for improved state and parameter estimation particularly when applied to multi-sensor image products. This paper demonstrates the application of a ‘multiple constraints’ model-data fusion (MCMDF) scheme to integrating AMSR-E soil moisture content (SMC) and MODIS land surface temperature (LST) data products with a coupled biophysical model of surface moisture and energy budgets for savannas of northern Australia. The focus in this paper is on the methods, difficulties and error sources encountered in developing an MCMDF scheme and enhancements for future schemes. An important aspect of the MCMDF approach emphasized here is the identification of inconsistencies between model and data, and among data sets.The MCMDF scheme was able to identify that an inconsistency existed between AMSR-E SMC and LST data when combined with the coupled SEB-MRT model. For the example presented, an optimal fit to both remote sensing data sets together resulted in an 84% increase in predicted SMC and 0.06% increase for LST relative to the fit to each data set separately. That is the model predicted on average cooler LST's (∼ 1.7 K) and wetter SMC values (∼ 0.04 g cm^− 3) than the satellite image products. In this instance we found that the AMSR-E SMC data on their own were poor constraints on the model. Incorporating LST data via the MCMDF scheme ameliorated deficiencies in the SMC data and resulted in enhanced characterization of the land surface soil moisture and energy balance based on comparison with the MODIS evapotranspiration (ET) product of Mu et al. [Mu, Q., Heinsch, F.A, Zhao, M. and Running, S.W. (in press), Development of a global evapotranspiration algorithm based on MODIS and global meteorology data, Remote Sensing of Environment.]. Canopy conductance, g_C, and latent heat flux, λE, from the MODIS ET product were in good agreement with RMSEs for g_C = 0.5 mm s^− 1 and for λE = 18 W m^− 2, respectively. Differences were attributable to a greater canopy-to-air vapor pressure gradient in the MCMDF approach obtained from a more realistic partitioning of soil surface and canopy temperatures.     

Can a satellite-derived estimate of the fraction of PAR absorbed by chlorophyll (FAPARchl) improve predictions of light-use efficiency and ecosystem photosynthesis for a boreal aspen forest?

We used daily MODerate resolution Imaging Spectroradiometer (MODIS) imagery obtained over a five-year period to analyze the seasonal and inter-annual variability of the fraction of absorbed photosynthetically active radiation (FAPAR) and photosynthetic light use efficiency (LUE) for the Southern Old Aspen (SOA) flux tower site located near the southern limit of the boreal forest in Saskatchewan, Canada. To obtain the spectral characteristics of a standardized land area to compare with tower measurements, we scaled up the nominal 500 m MODIS products to a 2.5 km × 2.5 km area (5 × 5 MODIS 500 m grid cells). We then used the scaled-up MODIS products in a coupled canopy-leaf radiative transfer model, PROSAIL-2, to estimate the fraction of absorbed photosynthetically active radiation (APAR) by the part of the canopy dominated by chlorophyll (FAPAR_chl) versus that by the whole canopy (FAPAR_canopy). Using the additional information provided by flux tower-based measurements of gross ecosystem production (GEP) and incident PAR, we determined 90-minute averages for APAR and LUE (slope of GEP:APAR) for both the physiologically active foliage (APAR_chl, LUE_chl) and for the entire canopy (APAR_canopy, LUE_canopy).The flux tower measurements of GEP were strongly related to the MODIS-derived estimates of APAR_chl (r² = 0.78) but only weakly related to APAR_canopy (r² = 0.33). Gross LUE between 2001 and 2005 for LUE_chl was 0.0241 µmol C µmol^− 1 PPFD whereas LUE_canopy was 36% lower. Time series of the 5-year normalized difference vegetation index (NDVI) were used to estimate the average length of the core growing season as days of year 152-259. Inter-annual variability in the core growing season LUE_chl (µmol C µmol^− 1 PPFD) ranged from 0.0225 in 2003 to 0.0310 in 2004. The five-year time series of LUE_chl corresponded well with both the seasonal phase and amplitude of LUE from the tower measurements but this was not the case for LUE_canopy. We conclude that LUE_chl derived from MODIS observations could provide a more physiologically realistic parameter than the more commonly used LUE_canopy as an input to large-scale photosynthesis models.     

Evaluating evapotranspiration and water-use efficiency of terrestrial ecosystems in the conterminous United States using MODIS and AmeriFlux data

In this study, we used the remotely-sensed data from the Moderate Resolution Imaging Spectrometer (MODIS), meteorological and eddy flux data and an artificial neural networks (ANNs) technique to develop a daily evapotranspiration (ET) product for the period of 2004-2005 for the conterminous U.S. We then estimated and analyzed the regional water-use efficiency (WUE) based on the developed ET and MODIS gross primary production (GPP) for the region. We first trained the ANNs to predict evapotranspiration fraction (EF) based on the data at 28 AmeriFlux sites between 2003 and 2005. Five remotely-sensed variables including land surface temperature (LST), normalized difference vegetation index (NDVI), normalized difference water index (NDWI), leaf area index (LAI) and photosynthetically active radiation (PAR) and ground-measured air temperature and wind velocity were used. The daily ET was calculated by multiplying net radiation flux derived from remote sensing products with EF. We then evaluated the model performance by comparing modeled ET with the data at 24 AmeriFlux sites in 2006. We found that the ANNs predicted daily ET well (R² = 0.52-0.86). The ANNs were applied to predict the spatial and temporal distributions of daily ET for the conterminous U.S. in 2004 and 2005. The ecosystem WUE for the conterminous U.S. from 2004 to 2005 was calculated using MODIS GPP products (MOD17) and the estimated ET. We found that all ecosystems' WUE-drought relationships showed a two-stage pattern. Specifically, WUE increased when the intensity of drought was moderate; WUE tended to decrease under severe drought. These findings are consistent with the observations that WUE does not monotonously increase in response to water stress. Our study suggests a new water-use efficiency mechanism should be considered in ecosystem modeling. In addition, this study provides a high spatial and temporal resolution ET dataset, an important product for climate change and hydrological cycling studies for the MODIS era.     

Testing a MODIS Global Disturbance Index across North America

Large-scale ecosystem disturbances (LSEDs) have major impacts on the global carbon cycle as large pulses of CO₂ and other trace gases from terrestrial biomass loss are emitted to the atmosphere during disturbance events. The high temporal and spatial variability of the atmospheric emissions combined with the lack of a proven methodology to monitor LSEDs at the global scale make the timing, location and extent of vegetation disturbance a significant uncertainty in understanding the global carbon cycle. The MODIS Global Disturbance Index (MGDI) algorithm is designed for large-scale, regular, disturbance mapping using Aqua/Moderate Resolution Imaging Spectroradiometer (MODIS) Land Surface Temperature (LST) and Aqua/MODIS Enhanced Vegetation Index (EVI) data. The MGDI uses annual maximum composite LST data to detect fundamental changes in land-surface energy partitioning, while avoiding the high natural variability associated with tracking LST at daily, weekly, or seasonal time frames. Here we apply the full Aqua/MODIS dataset through 2006 to the improved MGDI algorithm across the woody ecosystems of North America and test the algorithm by comparison with confirmed, historical wildfire events and the windfall areas of documented major hurricanes. The MGDI accurately detects the location and extent of wildfire throughout North America and detects high and moderate severity impacts in the windfall area of major hurricanes. We also find detections associated with clear-cut logging and land-clearing on the forest-agricultural interface. The MGDI indicates that 1.5% (195,580 km²) of the woody ecosystems within North America was disturbed in 2005 and 0.5% (67,451 km²) was disturbed in 2006. The interannual variability is supported by wildfire detections and official burned area statistics.     

Assessing structural effects on PRI for stress detection in conifer forests

The retrieval of indicators of vegetation stress from remote sensing imagery is an important issue for the accurate assessment of forest decline. The Photochemical Reflectance Index (PRI) has been demonstrated as a physiological index sensitive to the epoxidation state of the xanthophyll cycle pigments and to photosynthetic efficiency, serving as a proxy for short-term changes in photosynthetic activity, stress condition, and pigment absorption, but highly affected by illumination conditions, viewing geometry and canopy structure. In this study, a diurnal airborne campaign was conducted over Pinus sylvestris and Pinus nigra forest areas with the Airborne Hyperspectral Scanner (AHS) to evaluate the effects of canopy structure on PRI when used as an indicator of stress in a conifer forest. The AHS airborne sensor was flown at two times (8:00 GMT and 12:00 GMT) over forest areas under varying field-measured stress levels, acquiring 2 m spatial resolution imagery in 80 spectral bands in the 0.43-12.5 μm spectral range. Five formulations of PRI (based on R₅₃₁ as a xanthophyll-sensitive spectral band) were calculated using different reference wavelengths, such as PRI₅₇₀ (reference band R_REF = R₅₇₀), and the PRI modifications PRI_m1 (R_REF = R₅₁₂), PRI_m2 (R_REF = R₆₀₀), PRI_m3 (R_REF = R₆₇₀), and PRI_m4 (R_REF = R₅₇₀, R₆₇₀), along with other structural indices such as NDVI, SR, OSAVI, MSAVI and MTVI2. In addition, thermal bands were used for the retrieval of the land surface temperature. A radiative transfer modeling method was conducted using the LIBERTY and INFORM models to assess the structural effects on the PRI formulations proposed, studying the sensitivity of PRI_m indices to detect stress levels while minimizing the effects caused by the conifer architecture. The PRI indices were related to stomatal conductance, xanthophyll epoxidation state (EPS) and crown temperature. The modeling analysis showed that the coefficient of variation (CV) for PRI was 50%, whereas the CV for PRIm1 (band R512 as a reference) was only 20%. Simulation and experimental results demonstrated that PRI_m1 (R_REF = R₅₁₂) was less sensitive than PRI (R_REF = R₅₇₀) to changes in Leaf Area Index (LAI) and tree densities. PRI₅₁₂ was demonstrated to be sensitive to EPS at both leaf (r² = 0.59) and canopy level (r² = 0.40), yielding superior performance than PRI₅₇₀ (r² = 0.21) at the canopy level. In addition, PRI₅₁₂ was significantly related to water stress indicators such as stomatal conductance (Gs; r² = 0.45) and water potential (Ψ; r² = 0.48), yielding better results than PRI₅₇₀ (Gs, r² = 0.21; Ψ, r² = 0.21) due to the structural effects found on the PRI₅₇₀ index at the canopy level.     

On intra-annual EVI variability in the dry season of tropical forest: A case study with MODIS and hyperspectral data

Considerable controversy is associated with dry season increases in the Enhanced Vegetation Index (EVI), observed using the Moderate Resolution Imaging Spectroradiometer (MODIS), compared with field-based estimates of decreasing plant productivity. Here, we investigate potential causes of intra-annual variability by comparing EVI from mature forest with field-measured Leaf Area Index (LAI) to validate space-based observations. EVI was calculated from 19 nadir and off-nadir Hyperion images in the 2005 dry season, and inspected for consistency with MODIS observations from 2004 to 2009. The objective was to evaluate the possible influence of the view-illumination geometry and of canopy foliage and leaf flush on the EVI. Spectral mixture models were used to evaluate the relationship between EVI and the shade fraction, a measure that varies with pixel brightness. MODIS LAI values were compared with LAI estimated using hemispherical photographs taken in two field campaigns in the dry season. To keep LAI and leaf flush conditions as constant variables and vary solar illumination, we used airborne Hyperspectral Mapper (Hymap) data acquired over mature forest from another region on the same day but with two distinct solar zenith angles (SZA) (29° and 53°). Results showed that intra-annual variability in MODIS and nadir Hyperion EVI in the dry season of tropical forest were driven by solar illumination effects rather than changes in LAI. The reflectance of the MODIS and Hyperion blue, red and near infrared (NIR) bands was higher at the end of the dry season because of the predominance of sunlit canopy components for the sensors due to decreasing SZA from June (44°) to September (26°). Because EVI was highly correlated with the reflectance of the NIR band used to generate it (r of + 0.98 for MODIS and + 0.88 for Hyperion), this vegetation index followed the general NIR pattern, increasing with smaller SZA towards the end of the dry season. Hyperion EVI was inversely correlated with the shade fraction (r = − 0.93). Changes in canopy foliage detected from MODIS LAI data were not consistent with LAI estimates from hemispherical photographs. Although further research is necessary to measure the impact of leaf flush on intra-annual EVI variability in the Querência region, analysis of Hymap data with fixed LAI and leaf flush conditions confirmed the influence of the illumination effects on the EVI.     

Modeling gross primary production of alpine ecosystems in the Tibetan Plateau using MODIS images and climate data

The eddy covariance technique provides measurements of net ecosystem exchange (NEE) of CO₂ between the atmosphere and terrestrial ecosystems, which is widely used to estimate ecosystem respiration and gross primary production (GPP) at a number of CO₂ eddy flux tower sites. In this paper, canopy-level maximum light use efficiency, a key parameter in the satellite-based Vegetation Photosynthesis Model (VPM), was estimated by using the observed CO₂ flux data and photosynthetically active radiation (PAR) data from eddy flux tower sites in an alpine swamp ecosystem, an alpine shrub ecosystem and an alpine meadow ecosystem in Qinghai-Tibetan Plateau, China. The VPM model uses two improved vegetation indices (Enhanced Vegetation Index (EVI), Land Surface Water Index (LSWI)) derived from the Moderate Resolution Imaging Spectral radiometer (MODIS) data and climate data at the flux tower sites, and estimated the seasonal dynamics of GPP of the three alpine grassland ecosystems in Qinghai-Tibetan Plateau. The seasonal dynamics of GPP predicted by the VPM model agreed well with estimated GPP from eddy flux towers. These results demonstrated the potential of the satellite-driven VPM model for scaling-up GPP of alpine grassland ecosystems, a key component for the study of the carbon cycle at regional and global scales.     

Measuring forest structure and biomass in New England forest stands using Echidna ground-based lidar

A ground-based, upward-scanning, near-infrared lidar, the Echidna® validation instrument (EVI), built by CSIRO Australia, retrieves forest stand structural parameters, including mean diameter at breast height (DBH), stem count density (stems/area), basal area, and above-ground woody biomass with very good accuracy in six New England hardwood and conifer forest stands. Comparing forest structural parameters retrieved using EVI data with extensive ground measurements, we found excellent agreement at the site level using five EVI scans (plots) per site (R² = 0.94-0.99); very good agreement at the plot level for stem count density and biomass (R² = 0.90-0.85); and good agreement at the plot level for mean DBH and basal area (R² = 0.48-0.66). The observed variance at site and plot levels suggest that a sample area of at least 1 ha (10⁴ m²) is required to estimate these parameters accurately at the stand level using either lidar-based or conventional methods. The algorithms and procedures used to retrieve these structural parameters are dependent on the unique ability of the Echidna® lidar to digitize the full waveform of the scattered lidar pulse as it returns to the instrument, which allows consistent separation of scattering by trunks and large branches from scattering by leaves. This successful application of ground-based lidar technology opens the door to rapid and accurate measurement of biomass and timber volume in areal sampling scenarios and as a calibration and validation tool for mapping biomass using airborne or spaceborne remotely sensed data.     

Satellite-based and mesoscale regression modeling of monthly air and soil temperatures over complex terrain in Turkey

Simple regression algorithms were developed to quantify spatio-temporal dynamics of minimum and maximum air temperatures (T_min and T_max, respectively) and soil temperature for a depth of 0-5 cm (T_soil-5cm) across complex terrain in Turkey using Moderate Resolution Imaging Spectroradiometer (MODIS) data at a 500-m resolution. A total of 762 16-day MODIS composites (127 images × 6 bands) between 2000 and 2005 were averaged over a monthly basis to temporally match monthly T_min, T_max, and T_soil-5cm from 83 meteorological stations. A total of 60 (28 temporally averaged plus 32 time series-based) linear regression models of T_min, T_max, and T_soil-5cm were developed using best subsets procedure as a function of a combination of 12 explanatory variables: six MODIS bands of blue, red, near infrared (NIR), middle infrared (MIR), normalized difference vegetation index (NDVI), and enhanced vegetation index (EVI); four geographical variables of latitude, longitude, altitude, and distance to sea (DtS); and two temporal variables of month, and year. The best multiple linear regression models elucidated 65% (RMSE = 5.9 °C), 65% (RMSE = 5.1 °C), and 57% (RMSE = 6.9 °C) of variations in T_min, T_max, and T_soil-5cm, respectively, under a wide range of T_min (−34 to 25 °C), T_max (0.2-47 °C) and T_soil-5cm (−9 to 40 °C) observed at the 83 stations.