Teff (Eragrostis tef) processing,utilization and future opportunities: a review

The demand for food production has been constantly increasing due to rising population. In developed countries, for example, the emergence of regional production of old grains that are rarely utilized, along with the production of commonly consumed grains, has gained importance in recent years. These grains, known collectively as ancient or heirloom grains, have offered both farmers and consumers novel ways of cultivation and products with interesting taste, characteristics and nutritional value. Among the 30 000 plant species known, only five cereals currently provide more than 50% of the world's energy intake – bread wheat (Triticum aestivum), rice (Oryza sativa), sorghum (Sorghum bicolor), millets (Panicum sp.) and maize (Zea mays). The excessive utilization of these selected species has a great potential to cause genetic losses and difficulty in bridging future agricultural demands. Teff (Eragrostis tef), an ancient grain extensively cultivated in countries like Eritrea and Ethiopia, provides promising alternatives for new food uses since its nutritional value is significantly higher than most others cereal grains. The absence of gluten allows flexibility in food utilization since it can be directly substituted to gluten-containing products. The grain also offers an excellent balance of essential amino acids and minerals, which can fulfil the recommended daily intake and eliminates the need for fortification and enrichment. This review provides a general overview of the physical properties and nutritional composition of teff grains related to processing and applications in the food and feed industries. The current status of teff utilization, as well as the challenges in production and commercialization, and future opportunities is presented and discussed.     

Perception‐aware autonomous mast motion planning for planetary exploration rovers

Highly accurate real‐time localization is of fundamental importance for the safety and efficiency of planetary rovers exploring the surface of Mars. Mars rover operations rely on vision‐based systems to avoid hazards as well as plan safe routes. However, vision‐based systems operate on the assumption that sufficient visual texture is visible in the scene. This poses a challenge for vision‐based navigation on Mars where regions lacking visual texture are prevalent. To overcome this, we make use of the ability of the rover to actively steer the visual sensor to improve fault tolerance and maximize the perception performance. This paper answers the question of where and when to look by presenting a method for predicting the sensor trajectory that maximizes the localization performance of the rover. This is accomplished by an online assessment of possible trajectories using synthetic, future camera views created from previous observations of the scene. The proposed trajectories are quantified and chosen based on the expected localization performance. In this study, we validate the proposed method in field experiments at the Jet Propulsion Laboratory (JPL) Mars Yard. Furthermore, multiple performance metrics are identified and evaluated for reducing the overall runtime of the algorithm. We show how actively steering the perception system increases the localization accuracy compared with traditional fixed‐sensor configurations.     

Discovery of Affinity-Based Probes for Btk Occupancy Assays

Bruton's tyrosine kinase (Btk) is an attractive target for the treatment of a wide array of B-cell malignancies and autoimmune diseases. Small-molecule covalent irreversible Btk inhibitors targeting Cys481 have been developed for the treatment of such diseases. In clinical trials, probe molecules are required in occupancy studies to measure the level of engagement of the protein by these covalent irreversible inhibitors. The result of this pharmacodynamic (PD) activity provides guidance for appropriate dosage selection to optimize inhibition of the drug target and correlation of target inhibition with disease treatment efficacy. This information is crucial for successful evaluation of drug candidates in clinical trials. Based on the pyridine carboxamide scaffold of a novel solvent-accessible pocket (SAP) series of covalent irreversible Btk inhibitors, we successfully developed a potent and selective affinity-based biotinylated probe 12 (2-[(4-{4-[5-(1-{5-[(3aS,4S,6aR)-2-oxo-hexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanamido}-3,6,9,12-tetraoxapentadecan-15-amido)pentanoyl]piperazine-1-carbonyl}phenyl)amino]-6-[1-(prop-2-enoyl)piperidin-4-yl]pyridine-3-carboxamide). Compound 12 has been used in Btk occupancy assays for preclinical studies to determine the therapeutic efficacy of Btk inhibition in two mouse lupus models driven by TLR7 activation and type I interferon.     

Optimal Operation of Reservoir Systems using Simulated Annealing

A stochastic search technique, simulated annealing (SA), is used to optimize the operation of multiple reservoirs. Seminal application of annealing technique in general to multi-period, multiple-reservoir systems, along with problem representation and selection of different parameter values used in the annealing algorithm for specific cases is discussed. The search technique is improved with the help of heuristic rules, problem-specific information and concepts from the field of evolutionary algorithms. The technique is tested for application to a benchmark problem of four-reservoir system previously solved using a linear programming formulation and its ability to replicate the global optimum solution is examined. The technique is also applied to a system of four hydropower generating reservoirs in Manitoba, Canada, to derive optimal operating rules. A limited version of this problem is solved using a mixed integer nonlinear programming and results are compared with those obtained using SA. A better objective function value is obtained using simulated annealing than the value from a mixed integer non-linear programming model developed for the same problem. Results obtained from these applications suggest that simulated annealing can be used for obtaining near-optimal solutions for multi-period reservoir operation problems that are computationally intractable.     

Comparison of Representative Heuristic Algorithms for Multi-Objective Reservoir Optimal Operation

Heuristic algorithms (HAs) are widely used in multi-objective reservoir optimal operation (MOROO) due to the rapidity of the calculation and simplicity of their design. The literature usually focuses on one or two categories of HAs and simply reviews the state of the art. To provide an overall understanding and a specific comparison of HAs in MOROO, differential evolution (DE), particle swarm optimisation (PSO), and artificial physics optimisation (APO), which serve as typical examples of the three categories of HAs, are compared in terms of the development and applications using a designed experiment. Besides, the general model with constraints and fitness function, and the solution process using a hybrid feasible domain restoration method and penalty function method are also presented. Taking a designed experiment with multiple scenarios, the mean average of the optimal objective function values, the standard deviation of optimal objective function values, the mean average of the computational time, and population diversity are used for comparisons. Results of the comparisons show that (a) the problem of optimal multipurpose reservoir long-term operation is a mathematic programming problem with narrow feasible region and monotonic objective function; (b) it is easy to obtain the same optimal objective function value, but different optimal solutions using HAs; and (c) comparisons do not result in a clear winner, but DE can be more appropriate for MOROO.

     

A Framework for Interactive t-SNE Clustering

In this paper, we describe our progress in creating the framework for an interactive application that allows humans to actively participate in a t-SNE clustering process. t-SNE (t-Distributed Stochastic Neighbor Embedding) is a dimensionality reduction technique that maps high dimensional data sets to lower dimensions that can then be visualized for human interpretation. By prompting users to monitor outlying points during the t-SNE clustering process, we hypothesize that users may be able to make clustering faster and more accurate than purely algorithmic methods. Further research would test these hypotheses directly. We would also attempt to decrease the lag time between the various components of our application and develop an intuitive approach for humans to aid in clustering unlabeled data. Research into human assisted clustering can combine the strengths of both humans and computer programs to improve the results of data analysis.     

Spatio‐temporal trends of nutrients and physico‐chemical parameters on lake ecosystem and fisheries prior to onset of cage farming and re‐opening of the Mbita passage in the Nyanza Gulf of Lake Victoria

Many large lake ecosystems are experiencing increasing eutrophication and persistent cyanobacteria‐dominated algal blooms affecting their water quality and ecosystem productivity because of widespread non‐point and point nutrient sources. Accordingly, the present study utilized data of July 2003 and January–February 2004, as well as previous measurements of nutrients and physico‐chemical variables (electrical conductivity, dissolved oxygen, temperature, pH, turbidity and chlorophyll‐a), to characterize the spatial and temporal trends, as a means of better understanding the factors influencing lake environmental conditions, as support tools for long‐term ecosystem management and for better understanding the long‐term trends and effects. Inshore gulf areas were found to represent zones of maximum nutrient concentrations, compared to the deep main lake zones, with significant inter‐parameter correlations. Phosphorus, silicon and chlorophyll‐a concentrations were significantly correlated. Water electrical conductivity was also significantly and positively correlated with soluble reactive silicon (SRSi), alkalinity hardness DO, while exhibiting a negative association with water transparency. Water turbidity and transparency, electrical conductivity, and SRSi concentrations clearly describe a gradient from the gulf into the main lake. For such a shallow gulf, these findings suggest primary productivity is influenced mainly by the availability of nutrients, light transparency and the extent of availability of resuspended nutrients. The increasing eutrophic state of Lake Victoria is a serious concern since it contributes to an increased potential of more frequent occurrences of cyanobacterial blooms, a potential public health risk to both humans and wildlife. Improved understanding of influences from previous fish species introductions and concomitant changes in indigenous fish species, increased lake basin population and anthropogenic activities, water hyacinth resurgences, sustainability of biodiversity, and current interests in cage farming, are among the major concerns and challenges facing the contemporary Lake Victoria. The trends regarding nutrients and physico‐chemical characteristics are intended to support better monitoring efforts and data to promote the lake's ecosystem services and the sustainable management of the lake ecosystem.