Evolution on neutral networks accelerates the ticking rate of the molecular clock

Large sets of genotypes give rise to the same phenotype, because phenotypic expression is highly redundant. Accordingly, a population can accept mutations without altering its phenotype, as long as the genotype mutates into another one on the same set. By linking every pair of genotypes that are mutually accessible through mutation, genotypes organize themselves into neutral networks (NNs). These networks are known to be heterogeneous and assortative, and these properties affect the evolutionary dynamics of the population. By studying the dynamics of populations on NNs with arbitrary topology, we analyse the effect of assortativity, of NN (phenotype) fitness and of network size. We find that the probability that the population leaves the network is smaller the longer the time spent on it. This progressive ‘phenotypic entrapment’ entails a systematic increase in the overdispersion of the process with time and an acceleration in the fixation rate of neutral mutations. We also quantify the variation of these effects with the size of the phenotype and with its fitness relative to that of neighbouring alternatives.     

Temperature cycling and its effect on mechanical behaviours of highporosity chalks

Temperature history can have a significant effect on the strength of water-saturated chalk.In this study,hydrostatic stress cycles are applied to understand the mechanical response of chalk samples exposed to temperature cycling between each stress cycle,compared to the samples tested at a constant temperature.The total accumulated strain during a stress cycle and the irreversible strain are reported.Chalk samples from Kansas(USA)and Mons(Belgium),with different degrees of induration(i.e.amount of contact cementation),were used.The samples were saturated with equilibrated water(polar)and nonpolar Isopar H oil to quantify water weakening.All samples tested during 10 stress cycles with varying temperature(i.e.temperature cycled in between each stress cycle)accumulated more strain than those tested at constant temperatures.All the stress cycles were performed at 30℃.The two chalk types behaved similarly when saturated with Isopar H oil,but differently when saturated with water.When saturated with water,the stronger Kansas chalk accumulated more total strain and more irreversible strain within each stress cycle than the weaker Mons chalk.     

Modelling Gas Transmission in Cylindrical Dynamic Accumulation Oxygen Transmission Rate Chambers to Explore Implications of Oxygen Sensor Location Relative to Samples

A model was developed to simulate oxygen accumulation in space and time within cylindrical dynamic accumulation chambers that are used to measure oxygen transmission rate (OTR) of materials. The model is based on Fick's law of diffusion and was validated against actual OTR measurements of polymer film samples. Measured OTR values and thicknesses were inputted into the model and oxygen concentrations outputted by the model. OTRs determined from the output of the model was in close agreement to within 0.3–3% of the measured OTR. Oxygen concentration versus time curves generated from model output oxygen concentrations and experimentally measured oxygen concentrations for three actual films were also in agreement. The model was then used to simulate results from three hypothetical test films at varying chamber lengths in order to evaluate effects of accumulation chamber dimensions relative to films on resulting OTR measurements. A typical design scenario was used, where the oxygen sensor is mounted on the chamber wall opposite the sample film. Results demonstrate that dynamic accumulation OTR instrument designers have considerable flexibility in choosing accumulation chamber dimensions because deviations in OTR are only expected to occur at impractically extreme chamber lengths (>10 m) for the entire envelope of OTRs expected for typical packaging films. Copyright © 2014 John Wiley & Sons, Ltd.     

Effects of Different Oil Sources and Residues on Biomass and Metabolite Production by Yarrowia lipolytica YB 423-12

Yarrowia lipolytica is known to have the ability to assimilate hydrophobic substrates like triglycerides, fats, and oils, and to produce single-cell oils, lipases, and organic acids. The aim of the present study was to investigate the effects of different oil sources (borage, canola, sesame, Echium, and trout oils) and oil industry residues (olive pomace oil, hazelnut oil press cake, and sunflower seed oil cake) on the growth, lipid accumulation, and lipase and citric acid production by Y. lipolytica YB 423-12. The maximum biomass and lipid accumulation were observed with linseed oil. Among the tested oil sources and oil industry residues, hazelnut oil press cake was the best medium for lipase production. The Y. lipolytica YB 423-12 strain produced 12.32 ± 1.54 U/mL (lipase activity) of lipase on hazelnut oil press cake medium supplemented with glucose. The best substrate for citric acid production was found to be borage oil, with an output of 5.34 ± 0.94 g/L. The biotechnological production of valuable metabolites such as single-cell oil, lipase, and citric acid could be achieved by using these wastes and low-cost substrates with this strain. Furthermore, the cost of the bio-process could also be significantly reduced by the utilization of various low-cost raw materials, residues, wastes, and renewable resources as substrates for this yeast.     

The influence of bitumen on reservoir properties and hydrocarbon accumulation in the Santai Area of the Junggar Basin,North Western China

Bitumen's influence on reservoir properties and hydrocarbon accumulation in Santai area was studied by experiment measures and geochemical evidences. The porosity and permeability of the sandstones containing bitumen increased significantly by dissolving experiments, implying that bitumen strongly influences the reservoir properties. The analysis reveals that there were two stages of hydrocarbon accumulation. In the first stage oil migrated into coarse-grained sandstone and then degraded to bitumen, which deteriorated the reservoir properties. The second stage oil had to migrate into fine-grained sandstones, or the residual pores of the bitumen-containing coarse-grained sandstone. Exploration in this area should avoid the bitumen distribution zone.     

The effect of biomass co-combustion in a CFB boiler on solids accumulation on surfaces of P91 steel tube samples

The paper describes the results of industrial tests associated with the co-combustion of biomass and agromass with coal and focused on diagnostics and assessment of the effect of fuel type on the accumulation of solids on the surface of P91 steel tube samples placed in the vicinity of steam superheater in a commercial large-scale (over 400 MW) circulating fluidized bed boiler.Analysis of samples indicated the effect of fuel type, as well as the location of the area on the steel tube on the rate of solids accumulation. Alkali compounds were quite uniformly distributed at both front and rear sections of the steel tube samples, while calcium and sulfur components were mainly found in the front area. The average solids accumulation rates calculated for the rear areas of P91 steel tube samples were roughly two times higher than those for the front ones. The highest solids accumulation rate on the front area (1.04·10⁻⁹ ms⁻¹) was calculated for the case of agromass co-combustion with coal.